Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1377 |
Symbol | |
ID | 5709160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1450795 |
End bp | 1451562 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641275887 |
Product | proliferating cell nuclear antigen PcnA |
Protein accession | YP_001541193 |
Protein GI | 159041941 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.163855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATAG TGCTTGTGAG CAGTGTTAAG TTAACTTACC CTGATGGTAA GGAGTGGTAC TTGATAATGG ATGCAGTGGC GGTACTGGTT GAGGAGTCTG CCTTAACGGT AACTAAGGAT GGGGTTAAGC TTAGGGCCCT TGACCCATCC AGGACGGCAA TGGTTGACTT ATACATGCCT AGGACTGCCT TCGACGAGTA CCCTGACGTG GAGCAGGACA TTAACATTGG CGTTAACTTC AGTGAGGTTA AGAAGATACT GCAGAGGGCT GGCAAGGGTA GTAGCGTCAC CTTTGAGGTT GAGGAGAATA GTCTTAAAAT AAGAATGAGT GGTAAGGTAA CTAGGACTAT TAAACTACCC CTAATAGACA TTCCCGTTGA ACAATTACCA ACACCTAAGG TCATCTTCAC GGTTACGGCT AAGTTAGCTA GTGATGCCTT GAGACAGGCG GTGAAGGATG TGGAGGTTAT TGCTGATGCA GCTAAGTTTG AGGGTAAGGA GGATGGCTTA TACATTAGGG CTAGTAGCGA TAGGGGTGAG ACTGAGATTA AGTTTGATAA GGGTGGGGAG GTGTTGTTTG AGTATGATAA TAAGGAGACG GCTACGGCGA CGTATAGTGT TGATTACTTA TCCGATATCG TTAATAGGGC TTATCAAATA AGCGACATAG TCACCGTGGA GTTCGCCACC CAGAAGCCCC TGGCTTTAAC CTTTGAAATA TCGGGTGGTG GCACATTGGC GTACTTCGTA GCCCCAAGGA TAGAGTAA
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Protein sequence | MVIVLVSSVK LTYPDGKEWY LIMDAVAVLV EESALTVTKD GVKLRALDPS RTAMVDLYMP RTAFDEYPDV EQDINIGVNF SEVKKILQRA GKGSSVTFEV EENSLKIRMS GKVTRTIKLP LIDIPVEQLP TPKVIFTVTA KLASDALRQA VKDVEVIADA AKFEGKEDGL YIRASSDRGE TEIKFDKGGE VLFEYDNKET ATATYSVDYL SDIVNRAYQI SDIVTVEFAT QKPLALTFEI SGGGTLAYFV APRIE
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