Gene Cmaq_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1374 
Symbol 
ID5709869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1448785 
End bp1449363 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID641275884 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001541190 
Protein GI159041938 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.09884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTT ACGTAATAAG AGGTATGTCG AATAGTTATT TAACCAGTAA TGGTTTATTA 
ATTGATGCTG GTGTTAGGGT TAGGGATGTT TTGAGGATTT CAAGGGAGCA GGGTGTGGAG
GTTAGGTACC TCCTCATAAC TCACTACCAT ATTGACCACA TTAGGTATGC GTGGGATATT
GTTAAGCAAT TCCACTGCAG TGTGGTTGCA TCGGTGGCTG ATGCTAGAGT TATTGAGGGT
GAGGAGAAGC CTAGGGCTGC GGGTTTCCTT CAATTGCTGG TTTCACGCTT ATTTAGGTTT
AGGCCTGTTA AGGTTAATCT TAAGGTCAAT GATGGTGACG TGATTGAGGG GTATGAAGCC
ATATATGCGC CAGGGCATAC CCCAGGCAGT ACAGCGTACT TTAAGGATGG GGTCCTCTTC
AGTGGTGATG CGATAGTTGA ACGTGAGGGT AAGCCGGTGT TACCGCCGAG GGGTTTTACG
GTAAACATGA GTGAGGCCAT GAAGAGTTTC AGTAAGTTAA TGAGCCTTAA ACCTAAGGTA
ATTTACCCGG GGCATGGGAA ACCAATAGTA GTGGGTTAG
 
Protein sequence
MDVYVIRGMS NSYLTSNGLL IDAGVRVRDV LRISREQGVE VRYLLITHYH IDHIRYAWDI 
VKQFHCSVVA SVADARVIEG EEKPRAAGFL QLLVSRLFRF RPVKVNLKVN DGDVIEGYEA
IYAPGHTPGS TAYFKDGVLF SGDAIVEREG KPVLPPRGFT VNMSEAMKSF SKLMSLKPKV
IYPGHGKPIV VG