Gene Cmaq_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1346 
Symbol 
ID5710352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1421646 
End bp1424036 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content41% 
IMG OID641275853 
Producthypothetical protein 
Protein accessionYP_001541162 
Protein GI159041910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.390579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA TATTAGTAGC TTTACTAGTA TGTATATTAG TGCTTCCATT AACTGCACTT 
AGCTTAACCT TGGAATCATT CACCCCAGTT AACGAAACAA TGATTACCCT AACCCCATAC
ATAGGCTACG GCATAGTGAT TACTGGGGTT TACTCAAACC CAAGTGTAAA CTACCTCTAC
GTACTCTATG CGCGGATTAA CGCAACTGGT GGTGTATTAA TAATGAGTAA CGGTAACGTG
ATCGGGAATG TTAATCTCCC CAACTGTACG CAACCTTACC TAGCAGCCAT TAATTATGAG
GGAAACGTGA TCTATGTCTC ATGCCCCGCA AGTAACCTGG TTTATGAAAT AAACGGCTAT
ACTGCATCAA TAATTGGTTC AATTCCAGTT TCCTTTGAGC CAACGTGGGT TTACTACGAT
AATTACACAA ATCAACTATA CGTGGTTGCC TATGGTTCCG GGAAATTCCT TCAATACAAT
ATGATTAACT CAACATTAAG GTACTTTGAG GTGGCGTCAA CGATAAGTAA CCTATGGCCA
CCTGAGATAA TTATACCAAA TGGTAAGCTT AACCTAGTAT ACGTAATATA CGCCACAGGT
TACATCCTAT ACCTAAACAA TACCACACTG CAACTCCCCA GGAGTTACTG CTTAAACTGC
ATAATAGTTA ACTTAAACTC AACACCCCTC TACGCGTATT ATGATGAGGA GCATAACATA
CTATTCGTAT CAACTAAGGG AGGCTTATAT GCGTTAAATG GTTCAACAGG CAGTATCCTT
TATAATATAA GTATCTCCCC AACATGGCTA ACGGCTAACG TTAATGAAAG TCTACTCTAC
GCCTTAGTCA ATGACCTGGT TTACGTTTAC GAATACACTG AAGGCATGTA CTTTGAAATC
GGTGTGATAC ATTTACCATC AGTTGGGTCA TCAATAACAA TGATTGGTAA TAAGCTGTAC
GCCGCATTAC CCAGCCTAGG CATTATTGAT GAGGTCACCT TCTACAAGAG CCCGAATGGA
CTCTACCCAC TATACCTTTA CGTAAACTCA TCAAACTATA ACGTGACTTT AAACGGTCCA
GTGGACTTGA GGCTAATTAA CCTTCACTAT AATGCAACGG TAATGCTGCC TAACGGCATA
TATAATTTAA CAATAATGAC TCCTAAGGGT TACTACATTC AGCCGGCTAG CGTAATATTT
GCGATACATG ATTCAACAGT AAAGATAACT GCACCGGTGT ACGCATCATA TAAGTTAATA
TTCATGGAGG AGGGGTTGGC GTTAAATGAT ACGTGGAGCG TCTGGGTTTA TGGTTTAACA
TCATACGGTA ACCTATTTAA TGAAACATTA TCAGCCCCAG CCGGTAAGGA GATTGTGTTT
TATCTTGAAC CTGGATCCTA TAGGTTCATT ATTAATCCAG TGTTCGGGTA TTCACCAACA
CCCCCAAACG GCTTAGTATC AGTATCCTCA GCCGGCAGTA TTGTGATTCC AGTTAACTTC
ACTTTAATTA ATTACCCAGT TAACATTAAT GTAACTAACA TGGTGAGCGG GCTAAGTGTT
AAGGCGATTG TGCACGGGAA GACGATAGCC GGTACCACGG TTAACGAGGA CTTAACAATA
ATGGTACCAT ACTACACCAT ACTGCTTCCT GACGGTGAAT ACACGTTTAC TGTAACTGAT
GTGACTTACG GATCATATAA TAAGGTCGCG TCCCCAACCG TGAATAACAT AGCCTTCACA
GTGTGGGCTG GGATTAGGAA CATTAATGTG TCTCTTAGTG TTAATTATTA CCCACTTGAG
GTAAGTGAAA CCGGGTTAAT TAACAATGTT AAGTGGAGCT TAGGTGTAAG TGGAGTGTTC
TTCAATGGTA CACGCTACTC CTACGCAACA ACCCTAACTT CACCCAGTGA CTCAGTAACA
CTAATGCTGC CTGACGGATC ATATACCGTG TCATCAACCT CAAGCTACTT TAATGGATTC
AACAACCCGT ACAGTGCACC CGCCAGGAGT GTAACGATAA ATGGGGCTGG GGCTAACGTT
ACATTAACAT TCACGCCAGT ATCCTATACG CTCATAATTA GGGTGAGTAC CATATTGGGG
TTAGGGCAAT ACACGGTTAA TGTGGTTGGT GTCCAATTCA ATGGTCAACC ATACTCACTG
AGGTTAAAGT CAACTCAAGC ACTACTAGCT GTATCACTAG TGAGCGGTGA TTACTTAATA
CAGATTAATG GACCATACTA CATTACATCC TACAGTAAGC ACTTGGTAAT AAACGGGTTC
ATGCCTGCAC CGTTAAGCGT TAGGTTAATA GGATTAATGC TACCTGTAAT AATAATAGCG
GTTATTGCAG TAATAGTAGT GTTAATGCTT AGGAGGCTTG GATACATATG A
 
Protein sequence
MRIILVALLV CILVLPLTAL SLTLESFTPV NETMITLTPY IGYGIVITGV YSNPSVNYLY 
VLYARINATG GVLIMSNGNV IGNVNLPNCT QPYLAAINYE GNVIYVSCPA SNLVYEINGY
TASIIGSIPV SFEPTWVYYD NYTNQLYVVA YGSGKFLQYN MINSTLRYFE VASTISNLWP
PEIIIPNGKL NLVYVIYATG YILYLNNTTL QLPRSYCLNC IIVNLNSTPL YAYYDEEHNI
LFVSTKGGLY ALNGSTGSIL YNISISPTWL TANVNESLLY ALVNDLVYVY EYTEGMYFEI
GVIHLPSVGS SITMIGNKLY AALPSLGIID EVTFYKSPNG LYPLYLYVNS SNYNVTLNGP
VDLRLINLHY NATVMLPNGI YNLTIMTPKG YYIQPASVIF AIHDSTVKIT APVYASYKLI
FMEEGLALND TWSVWVYGLT SYGNLFNETL SAPAGKEIVF YLEPGSYRFI INPVFGYSPT
PPNGLVSVSS AGSIVIPVNF TLINYPVNIN VTNMVSGLSV KAIVHGKTIA GTTVNEDLTI
MVPYYTILLP DGEYTFTVTD VTYGSYNKVA SPTVNNIAFT VWAGIRNINV SLSVNYYPLE
VSETGLINNV KWSLGVSGVF FNGTRYSYAT TLTSPSDSVT LMLPDGSYTV SSTSSYFNGF
NNPYSAPARS VTINGAGANV TLTFTPVSYT LIIRVSTILG LGQYTVNVVG VQFNGQPYSL
RLKSTQALLA VSLVSGDYLI QINGPYYITS YSKHLVINGF MPAPLSVRLI GLMLPVIIIA
VIAVIVVLML RRLGYI