Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1346 |
Symbol | |
ID | 5710352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1421646 |
End bp | 1424036 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641275853 |
Product | hypothetical protein |
Protein accession | YP_001541162 |
Protein GI | 159041910 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.390579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAA TATTAGTAGC TTTACTAGTA TGTATATTAG TGCTTCCATT AACTGCACTT AGCTTAACCT TGGAATCATT CACCCCAGTT AACGAAACAA TGATTACCCT AACCCCATAC ATAGGCTACG GCATAGTGAT TACTGGGGTT TACTCAAACC CAAGTGTAAA CTACCTCTAC GTACTCTATG CGCGGATTAA CGCAACTGGT GGTGTATTAA TAATGAGTAA CGGTAACGTG ATCGGGAATG TTAATCTCCC CAACTGTACG CAACCTTACC TAGCAGCCAT TAATTATGAG GGAAACGTGA TCTATGTCTC ATGCCCCGCA AGTAACCTGG TTTATGAAAT AAACGGCTAT ACTGCATCAA TAATTGGTTC AATTCCAGTT TCCTTTGAGC CAACGTGGGT TTACTACGAT AATTACACAA ATCAACTATA CGTGGTTGCC TATGGTTCCG GGAAATTCCT TCAATACAAT ATGATTAACT CAACATTAAG GTACTTTGAG GTGGCGTCAA CGATAAGTAA CCTATGGCCA CCTGAGATAA TTATACCAAA TGGTAAGCTT AACCTAGTAT ACGTAATATA CGCCACAGGT TACATCCTAT ACCTAAACAA TACCACACTG CAACTCCCCA GGAGTTACTG CTTAAACTGC ATAATAGTTA ACTTAAACTC AACACCCCTC TACGCGTATT ATGATGAGGA GCATAACATA CTATTCGTAT CAACTAAGGG AGGCTTATAT GCGTTAAATG GTTCAACAGG CAGTATCCTT TATAATATAA GTATCTCCCC AACATGGCTA ACGGCTAACG TTAATGAAAG TCTACTCTAC GCCTTAGTCA ATGACCTGGT TTACGTTTAC GAATACACTG AAGGCATGTA CTTTGAAATC GGTGTGATAC ATTTACCATC AGTTGGGTCA TCAATAACAA TGATTGGTAA TAAGCTGTAC GCCGCATTAC CCAGCCTAGG CATTATTGAT GAGGTCACCT TCTACAAGAG CCCGAATGGA CTCTACCCAC TATACCTTTA CGTAAACTCA TCAAACTATA ACGTGACTTT AAACGGTCCA GTGGACTTGA GGCTAATTAA CCTTCACTAT AATGCAACGG TAATGCTGCC TAACGGCATA TATAATTTAA CAATAATGAC TCCTAAGGGT TACTACATTC AGCCGGCTAG CGTAATATTT GCGATACATG ATTCAACAGT AAAGATAACT GCACCGGTGT ACGCATCATA TAAGTTAATA TTCATGGAGG AGGGGTTGGC GTTAAATGAT ACGTGGAGCG TCTGGGTTTA TGGTTTAACA TCATACGGTA ACCTATTTAA TGAAACATTA TCAGCCCCAG CCGGTAAGGA GATTGTGTTT TATCTTGAAC CTGGATCCTA TAGGTTCATT ATTAATCCAG TGTTCGGGTA TTCACCAACA CCCCCAAACG GCTTAGTATC AGTATCCTCA GCCGGCAGTA TTGTGATTCC AGTTAACTTC ACTTTAATTA ATTACCCAGT TAACATTAAT GTAACTAACA TGGTGAGCGG GCTAAGTGTT AAGGCGATTG TGCACGGGAA GACGATAGCC GGTACCACGG TTAACGAGGA CTTAACAATA ATGGTACCAT ACTACACCAT ACTGCTTCCT GACGGTGAAT ACACGTTTAC TGTAACTGAT GTGACTTACG GATCATATAA TAAGGTCGCG TCCCCAACCG TGAATAACAT AGCCTTCACA GTGTGGGCTG GGATTAGGAA CATTAATGTG TCTCTTAGTG TTAATTATTA CCCACTTGAG GTAAGTGAAA CCGGGTTAAT TAACAATGTT AAGTGGAGCT TAGGTGTAAG TGGAGTGTTC TTCAATGGTA CACGCTACTC CTACGCAACA ACCCTAACTT CACCCAGTGA CTCAGTAACA CTAATGCTGC CTGACGGATC ATATACCGTG TCATCAACCT CAAGCTACTT TAATGGATTC AACAACCCGT ACAGTGCACC CGCCAGGAGT GTAACGATAA ATGGGGCTGG GGCTAACGTT ACATTAACAT TCACGCCAGT ATCCTATACG CTCATAATTA GGGTGAGTAC CATATTGGGG TTAGGGCAAT ACACGGTTAA TGTGGTTGGT GTCCAATTCA ATGGTCAACC ATACTCACTG AGGTTAAAGT CAACTCAAGC ACTACTAGCT GTATCACTAG TGAGCGGTGA TTACTTAATA CAGATTAATG GACCATACTA CATTACATCC TACAGTAAGC ACTTGGTAAT AAACGGGTTC ATGCCTGCAC CGTTAAGCGT TAGGTTAATA GGATTAATGC TACCTGTAAT AATAATAGCG GTTATTGCAG TAATAGTAGT GTTAATGCTT AGGAGGCTTG GATACATATG A
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Protein sequence | MRIILVALLV CILVLPLTAL SLTLESFTPV NETMITLTPY IGYGIVITGV YSNPSVNYLY VLYARINATG GVLIMSNGNV IGNVNLPNCT QPYLAAINYE GNVIYVSCPA SNLVYEINGY TASIIGSIPV SFEPTWVYYD NYTNQLYVVA YGSGKFLQYN MINSTLRYFE VASTISNLWP PEIIIPNGKL NLVYVIYATG YILYLNNTTL QLPRSYCLNC IIVNLNSTPL YAYYDEEHNI LFVSTKGGLY ALNGSTGSIL YNISISPTWL TANVNESLLY ALVNDLVYVY EYTEGMYFEI GVIHLPSVGS SITMIGNKLY AALPSLGIID EVTFYKSPNG LYPLYLYVNS SNYNVTLNGP VDLRLINLHY NATVMLPNGI YNLTIMTPKG YYIQPASVIF AIHDSTVKIT APVYASYKLI FMEEGLALND TWSVWVYGLT SYGNLFNETL SAPAGKEIVF YLEPGSYRFI INPVFGYSPT PPNGLVSVSS AGSIVIPVNF TLINYPVNIN VTNMVSGLSV KAIVHGKTIA GTTVNEDLTI MVPYYTILLP DGEYTFTVTD VTYGSYNKVA SPTVNNIAFT VWAGIRNINV SLSVNYYPLE VSETGLINNV KWSLGVSGVF FNGTRYSYAT TLTSPSDSVT LMLPDGSYTV SSTSSYFNGF NNPYSAPARS VTINGAGANV TLTFTPVSYT LIIRVSTILG LGQYTVNVVG VQFNGQPYSL RLKSTQALLA VSLVSGDYLI QINGPYYITS YSKHLVINGF MPAPLSVRLI GLMLPVIIIA VIAVIVVLML RRLGYI
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