| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1326 |
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| Symbol | |
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| ID | 5710070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1400293 |
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| End bp | 1401270 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275833 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001541142 |
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| Protein GI | 159041890 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0057642 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.612018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGAAG CCTTAATTAG AACGAAGGAG TTATCAAAGT GGTTCCTGGC TAAGAAGTAC
GGCTTATTGG AGAGGATTTT CAGGGAGAAG CCAATATACG TTAGGGCTGT GGATAACGTT
AACATAACAG TGGAGAGGGC TCTAACAACC GCCCTAGTGG GTGAGAGTGG TAGTGGTAAG
ACAACCCTAG GTAGGTTATT AACAACACTG GAGACTCCCA CGTCAGGTAG AATATTCTTC
AATAATGTTG ACGTAACCTC CCTTAAGGGT CATGAATTGA AGAGGTTTAG GACGAGGGTT
CAGATGGTTT TCCAGGACCC TTACTCAAGC CTGGACCCAA GGATGAGGGT TAGGGATATT
ATTGCTGAAC CATTAGTAGC TAGGGGGATT AAGGGGAGTG AGTTAAGTGA GAGGGTGTTT
AAGATTATGG AGGAGGTTGG GCTTGAGCAA TCCCTCGCTG AAAGAAGACC CAGTGACCTT
AGTGGTGGAC AGAGGCAGAG GGTTGCGGTG GCTAGGGCTG TGATAAGTAA TCCAGAGTTC
ATTGTTCTTG ATGAACCAAC CTCAGCCCTA GACGTATCCA CTCAATCACA GGTACTTAAT
CTACTGGCTG AACTCCAGGA GAGGCATAAG TTAACCTACC TACTCATAAC ACATAACATA
TCAGTGGCAA GGTACCTCAG CGATAAGATA ATGGTGATGT ACATGGGTAA GGTAGTTGAG
TCAGGAGATA CATTAAACGT GTTGAAGGAG CCTCAACACC CCTATACTCA AGCCTTAATA
GAGTCAATAC CTGATATTGG GAAGAGGGAT TTAAAACCAC CCAGTGGTGA GGTTGGTAGC
CTAATTAACC CGCCTCCGGG TTGTAGGTTT CATCCAAGGT GCCCATTCGC CATGGATATT
TGCCGTAGGG AGGAGCCGCC TATGATTGAG GTTAAGAATG GTATATACGT TGCCTGCTGG
CTATACGCCA AGAGGTAG
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| Protein sequence | MPEALIRTKE LSKWFLAKKY GLLERIFREK PIYVRAVDNV NITVERALTT ALVGESGSGK
TTLGRLLTTL ETPTSGRIFF NNVDVTSLKG HELKRFRTRV QMVFQDPYSS LDPRMRVRDI
IAEPLVARGI KGSELSERVF KIMEEVGLEQ SLAERRPSDL SGGQRQRVAV ARAVISNPEF
IVLDEPTSAL DVSTQSQVLN LLAELQERHK LTYLLITHNI SVARYLSDKI MVMYMGKVVE
SGDTLNVLKE PQHPYTQALI ESIPDIGKRD LKPPSGEVGS LINPPPGCRF HPRCPFAMDI
CRREEPPMIE VKNGIYVACW LYAKR
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