Gene Cmaq_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1320 
Symbol 
ID5710207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1396179 
End bp1396592 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID641275827 
ProductDNA polymerase beta subunit 
Protein accessionYP_001541136 
Protein GI159041884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.475196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.327189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA GGTGGTTAAC AACCCTCAGT GAGGTTTCTA GGATTAGGGA GAATAGGTTT 
AAGGAGACTT TGAATGAATT ATGCAGTAGG GCGCTTGTCG TAGTATTATT TGGTTCAAGG
GCTAGGGGTG ATTATACGCC TTTAAGTGAC TGGGATCTGC TAGCCATTGT TGCTGATGGT
GAATACAGGG TTGAGATAAT GGATGTTGGG CAGGTGGTTT GGCTGCCTCT AAGTAGGCTT
AATAATGTAC TTAAGAACTC AATGATAATA CTTGACGCCG TAACTGATGG TAAGGTGCTT
TGCGGGGATT CTAGAATATT TGAGGTGGTT AAAGGTAGGG TTAACGAGTA TATTGAGGAG
ATGAGACTGG TAAGGACTAA GCATGGTTGG TTCCCTAAGA ATACTACCGC ATGA
 
Protein sequence
MFSRWLTTLS EVSRIRENRF KETLNELCSR ALVVVLFGSR ARGDYTPLSD WDLLAIVADG 
EYRVEIMDVG QVVWLPLSRL NNVLKNSMII LDAVTDGKVL CGDSRIFEVV KGRVNEYIEE
MRLVRTKHGW FPKNTTA