Gene Cmaq_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1313 
Symbol 
ID5708560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1387199 
End bp1387945 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID641275820 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_001541130 
Protein GI159041878 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.511728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAGG TATACATTGT TGGGGCTGGT CCAGGGGATC CTGAGTTAAT TACAGTTAAG 
GCTATTAAAC TAGTGGAGTC AGCTGATGTA ATTATCTACG ATAGGTTAAT CCCAGTGGAT
GTTCTTAAAC ATGCCAAGGA GGGGGCTGAG TTAATATACG TTGGTAAGGA ACCTGGTAAA
CACACCATGG AGCAGGGTGA GATTAATGAA TTACTCCTCA GGAAGGCCCT TGAAGGTAAA
ATGGTTGTTA GGCTTCATGG AGGCGACCCA TTCGTCTTCG GTAGGGGTTT CGAGGAATGC
CAATACTTAA TTAAGAATGG GGTTGAATGC GAAGCAGTAC CCGGAGTAAC CAGCGCCATA
GCGGCACCGG AGCAGTACCT GGTCCCAATA CTACTTAGGG GTGTGTCCAG TAGTGTCGCC
TTAGTGACTG GTAGGGAGGA TCCGGGAAAG GGGTTTAGGG AAGTTGACTT TAAGAAACTA
GCCACGGTCG TTGGCACAAT AGTAATACTA ATGGGTGCCT CTGAGGCATG CAGGATAGCT
GAGGAGCTTA TTCAAGGAGG CTTAGATTCA AGTACACCTG TGGCGGTAGT GACGAGGGCC
TACATGAGTG ATTCAAGAAT TCAATTCACA ACCCTAAGTG AAATATCTAA GTGCAGAATC
ACCGTGGAGA ATCCATCAGT AATAATAGTG GGTAAGTCAG TCAAGCTCAG TCCACTATAT
GAAGATACCG TAGACCACTC AGCATGA
 
Protein sequence
MAKVYIVGAG PGDPELITVK AIKLVESADV IIYDRLIPVD VLKHAKEGAE LIYVGKEPGK 
HTMEQGEINE LLLRKALEGK MVVRLHGGDP FVFGRGFEEC QYLIKNGVEC EAVPGVTSAI
AAPEQYLVPI LLRGVSSSVA LVTGREDPGK GFREVDFKKL ATVVGTIVIL MGASEACRIA
EELIQGGLDS STPVAVVTRA YMSDSRIQFT TLSEISKCRI TVENPSVIIV GKSVKLSPLY
EDTVDHSA