| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1296 |
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| Symbol | carB |
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| ID | 5708906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1367972 |
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| End bp | 1371067 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275803 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001541113 |
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| Protein GI | 159041861 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.163057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAGTG TCTTAATAAT TGGTAGTGGG GCAATTAAGG TTGCTGAGGC TGCTGAATTC
GATTACTCAG GTATACAGGC ATTGAAGGCA TTTAGGGAGG AGGGTATTAG GACTATTCTA
GTTAACCCAA ATGTAGCCAC TGTCCAAACA ACCAATGTAT TCGCCGATAG GGTTTACTTC
ACCCCCATTA AGACTCAGTT CCTTGAGAAG GTTATTGAAC AGGAGAGACC TGACGCAATT
GCCTGCGGCT TCGGGGGTCA AACAGCGTTA TCAGCCTGCA TAAACCTTAA TGATGCAGGG
GTGTTGAGTA AGTATGGTGT AAAGGTACTG GGTACCCCGA TAGAGGGTAT TAGAAGTGCA
TTAAGTAGGG ACTTATTCAA GAATCTAATG TTAAGTAAAG GCCTACCTGT ACTTAAGTCA
GTAACAGCAC ACGGCATTAA TGAGGCGTTA AGGGGGGCTG AGGAGATTGG GTACCCAGTG
CTGGTTAGGG TTTCATTCAA CTTAGGTGGT GCAGGTGCAT TTGTGGCTAG GAGTAGTGAG
GAGTTGGTGA GTAGGATGCA TAAGGCGCTT GCTCAAAGTG AAATCAAGGA GGTTCTGATA
GAGAAGTACA TTGGTGGGTG GAAGGAGATT GAGTTCGAGG TGATGAGGGA CTCCCACGGT
GACTCAGTGG CTGTGGTGTG TATGGAGAAC ATTGACCCAA TGGGTATTCA CACAGGGGAC
TCAGTTGTAG TGGCGCCGTG CTTAACGTTA ACTAATGATG AGTACCAAAG GTCAAGGTAC
ATTTCAATTA AAGTGGCTGA ATCCATTGGG CTAGTGGGTG AATGCAATGT ACAGGTAGCC
ATTGATAATA AGGGCCCTGA AATGTACGTG GTTGAAACTA ACCCAAGGAT GAGTAGGTCA
AGTGCCCTAG CCAGTAAAGC CTCAGGATAC CCTCTAGCCT ACATAGCGGC TAAACTGGCT
TTAGGCTATA GGTTAAGTGA ACTCCTCAAT AAGGTAACCG GTAGAACAAT AACAGCCTTT
GAACCAAGCC TAGACTACAT TGTGGTTAAG ATACCTAGGT GGGAGAACGA TAGGTTCAAT
GTTAATGAGT CACTTGGCCC AGAGATGATG AGTATAGGTG AGGTAATGGG TATTGGCAGG
ACCCTTGAGG AGGCTTGGCA GAAGGCAGTG AGGATGCTGG ATATTGGTGA ACCAGGCCTA
GTGGGTGGAC GCATATACAA TGAGTCAACC CTTGAGGAGG CTGTTAAGAT GGTTAAGGAG
AGGAAGCCTT ACTGGTTCCT ATACGCCGCT AGGCTTCTTA AGGATGGTTA CAGTATTGAT
GATATTTCAG AATGGACTGG GGTTGATAGA TTCTTCATAA ATGCAATTAA GAATGTAGTG
GATACCTATG AATTAATCAA GAGGGGTGGT GAATTACCGG TTAGTGAGGT TTACGCCCTA
GGCTTCAGTG AGGAGCAACT TAGGGGTATT GGGGCGTATT TAAGTCAAGG TGTTGTTAAG
GTTGTTAAGC AGATAGATAC CCTTGCCGGT GAATGGCCTG CATCAACCAA CTACCTATAC
TTAACCAGTG GTGGTCAATT CGATGATAAT ACTGGACCCA GTGTTGATGC ATTAGTTATT
GGTGCAGGCG TATTCAGGAT TGGTGTTAGC GTTGAGTTCG ATTGGTCAGT GGTTAATACT
GTGCTTGGCC TTAGGGAGTT GGGTTACAGG GTTGGTGTAG TTAATTACAA CCCTGAAACA
GTTAGCACCG ACTGGGACTT CGCAGATAAA TTATTCTTCG AGGAGTTAAC ACCTGAGGCG
CTTAGATGGA TTATAATTAA GGAGAACCCT AAGTTAGTGG TATTATGGGC TGGTGGACAG
ATTGGGCAAA GGCTATACAG TAAGGCGCGC ACATGGATAG GTGACTCTAG GATACTTGGC
ACTGATCCAA GTTCCATTGA CTTAGCTGAG GATAGGGTTA AGTTCTCTAA GCTACTTGAT
AAGCTTAACG TGGCTCAACC ACCATGGGCT TACGCAAGCA GTATGGGTGA GTTAATCAAC
CTGGTGGAGA GGTGGCTTGA TTACCCAGTA ATAGTGAGGC CCAGTTATGT TCTCGGTGGA
ACATACATGG GTGTGGCTAG GAATAGGAGT GAGTTAACCA GCTTTGTTGA GAAGGCTGCT
AAAATAAGCC CAGAACACCC AGTGTTAGTG TCAAAGTTTT TAAAGGGCGG TGTTGAGGCT
GAGACTGACG GTGTCAGTGA TGGTAAGGGA ACCATACTAA TCCCCATAGA ACACGTTGAA
CCACCCGGTG TACACTCCGG GGATAGTACA ATGGTCCTTG TACCCAATGG GTCAAGTTAT
AGGTTAAGTA ATGGGCAAGT TAATGAAATG GCTAAGGTAA CTCATTTAAT AGCCTCAGAA
TTAGGTGTTA AGGGTCCATT AAATGTTCAA TTCATAATAA GTGATAAGGT CTACGTAATT
GAGGCTAACA TTAGGTCAAG TAGATCAATG CCCCTCAGCA GTAAGGCCAC TGGAATTAAC
CTAGCTAAAC TAGCCTTAAG AGCAGCAATA AGTGGACTTG GTATAGAGGG TTATAGGTTA
ATTAAGCCTA GGGAATGGTG GGTTAAGTCG GCTCAATTCT CATGGTCAAG GATAAGGGGC
GCATACCCAA GGCTTGGCCC AGTCATGTAT AGTACGGGGG AGGTTGCTTC AAGTGGAGTC
ACCCTGGAGG AGGCTCTCCT TAAATCATGG TTATCCACAG TACCATCAAG AATACCGAGT
AATAACGCCC TAGTCTACAC TTACGATGAG GATCACGTTA AGAACATTGA GGAAGCCAGG
AGGCTACTTA GCCAGTATTT AAACATAATT GAAGTGGAGA AGGCGCATGA ATTACTGAAG
CTTGGTAAAG TCGATATCCT GGTTACTGGA GGATCCACCG AGGATAAGGA TTACGTAACC
CGTAGACTGG CTGCAGACAC ATCCACCCCA CTCATCTTAG ACTCAACACT AGGGCTTGAG
TTGGCTAGGG CGTTTAAATG GTATTGGAGT GGTGGTGAAT TAAACGTTAA GCCATGGGGT
GGTGAATCAA GTATAGGTGA CCTTAAGTGG AGTTAA
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| Protein sequence | MRSVLIIGSG AIKVAEAAEF DYSGIQALKA FREEGIRTIL VNPNVATVQT TNVFADRVYF
TPIKTQFLEK VIEQERPDAI ACGFGGQTAL SACINLNDAG VLSKYGVKVL GTPIEGIRSA
LSRDLFKNLM LSKGLPVLKS VTAHGINEAL RGAEEIGYPV LVRVSFNLGG AGAFVARSSE
ELVSRMHKAL AQSEIKEVLI EKYIGGWKEI EFEVMRDSHG DSVAVVCMEN IDPMGIHTGD
SVVVAPCLTL TNDEYQRSRY ISIKVAESIG LVGECNVQVA IDNKGPEMYV VETNPRMSRS
SALASKASGY PLAYIAAKLA LGYRLSELLN KVTGRTITAF EPSLDYIVVK IPRWENDRFN
VNESLGPEMM SIGEVMGIGR TLEEAWQKAV RMLDIGEPGL VGGRIYNEST LEEAVKMVKE
RKPYWFLYAA RLLKDGYSID DISEWTGVDR FFINAIKNVV DTYELIKRGG ELPVSEVYAL
GFSEEQLRGI GAYLSQGVVK VVKQIDTLAG EWPASTNYLY LTSGGQFDDN TGPSVDALVI
GAGVFRIGVS VEFDWSVVNT VLGLRELGYR VGVVNYNPET VSTDWDFADK LFFEELTPEA
LRWIIIKENP KLVVLWAGGQ IGQRLYSKAR TWIGDSRILG TDPSSIDLAE DRVKFSKLLD
KLNVAQPPWA YASSMGELIN LVERWLDYPV IVRPSYVLGG TYMGVARNRS ELTSFVEKAA
KISPEHPVLV SKFLKGGVEA ETDGVSDGKG TILIPIEHVE PPGVHSGDST MVLVPNGSSY
RLSNGQVNEM AKVTHLIASE LGVKGPLNVQ FIISDKVYVI EANIRSSRSM PLSSKATGIN
LAKLALRAAI SGLGIEGYRL IKPREWWVKS AQFSWSRIRG AYPRLGPVMY STGEVASSGV
TLEEALLKSW LSTVPSRIPS NNALVYTYDE DHVKNIEEAR RLLSQYLNII EVEKAHELLK
LGKVDILVTG GSTEDKDYVT RRLAADTSTP LILDSTLGLE LARAFKWYWS GGELNVKPWG
GESSIGDLKW S
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