| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1247 |
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| Symbol | |
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| ID | 5709399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1317076 |
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| End bp | 1317996 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275752 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001541064 |
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| Protein GI | 159041812 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.466295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00358039 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTTAGGA AAACCGTGGA AGCCATAATT AAGGGTACTT GGACTAGGGA TGGTGCCGGT
GTTAAATTAT ATAGGGTATT CGGTAGCCCT GAATTAGTGG ATTTAATGGA TCCATTCCTG
TTACTTGATC ATTTCGGTTC AAGGTATCCG CATGAGTACT TAATGGGTTT CCCATGGCAC
CCTCACAGGG GTATTGAAAC CGTAACATAC TTACTTAAGG GTGAGGTTCA TCATAGGGAT
AGTACAGGGG TTAAGGGAGT ATTGGGTGAG GGTGATGTTC AGTGGATGAC TGCGGGTAGT
GGGATATTTC ATGAGGAGAT GCCTAAGCCA GGTAGGAGGA TGGTTAATGG GTCAGTTATA
GAGGACCCTG AGGTCAGTGG TTTTCAGCTT TGGGTTAACT TACCTAGGGT AAGTAAAATG
AGTAGGCCAA AGTACAGGAA TTTAAGCAGA AACAGTGTGC CTAGGGTGAT TCTTGATAAT
GGTGTGAAGG TTACGTTAAT CTCAGGTAGA GTTAAGGCTC CTGGATACGG GATCGTTGAG
GGACCCATAA ATGACTTAGC CACACCGGTT AATTACATTG ATGTGTTAAT TCCTGAGGAG
TCTACGTTCA GTTATGAGGT TAAGGATGGT TACACTGCGC TTATTTACGT CATTAATGGT
TCATTAATCC CAGGTAATGA AGGTAACCCA GTTGCGTCAG GTCAACTGGT GGTTTACTCA
AGGGATGGTG GGGAAATTAA CGTTAGGACC ATGGATAAGC CAGCCAGATT CCTGCTCCTT
GCAGGTAGAC CAATTAATGA GCCTGTGGCT TGGTATGGAC CAATAGTCAT GAATACTTGG
GATGAGTTGG AGGAGGCCTT CACAGAGTTA AGGGCAGGCA CCTTCATTAA GCATGAACCT
GAGGTTAATG ATATTGATTA A
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| Protein sequence | MVRKTVEAII KGTWTRDGAG VKLYRVFGSP ELVDLMDPFL LLDHFGSRYP HEYLMGFPWH
PHRGIETVTY LLKGEVHHRD STGVKGVLGE GDVQWMTAGS GIFHEEMPKP GRRMVNGSVI
EDPEVSGFQL WVNLPRVSKM SRPKYRNLSR NSVPRVILDN GVKVTLISGR VKAPGYGIVE
GPINDLATPV NYIDVLIPEE STFSYEVKDG YTALIYVING SLIPGNEGNP VASGQLVVYS
RDGGEINVRT MDKPARFLLL AGRPINEPVA WYGPIVMNTW DELEEAFTEL RAGTFIKHEP
EVNDID
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