Gene Cmaq_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1232 
SymbolanmK 
ID5709728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1301629 
End bp1302774 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content44% 
IMG OID641275736 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001541049 
Protein GI159041797 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.186226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.46728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTTT TATCCATTGT CACTGGAACA TCATCAGATG GAGCTGATGC ATCACTTATT 
GACCTAAAGG GATGCGGTAA GGCTACGAAA TTTAAGATAA TTAAATACAC ATCCTTCAGT
TACCCTGAGG GGCTTAGGAG GGAATTATTA AGAGTCTCAT CACTGGAGCG TATTACTGCT
GAAGAATTCA GTAGGGTTCA CTGGGACTTG GGGAGATTTC TCGCAGGTAG CGTAGTGGGT
AGCTTTAATA AGAGTGAGTA TGATATCATC GCCTACTCCG GGTACACTGT ATATCATGGG
CCTGCATTAG GTAGGAGGGA TTATGGTACA CTGCAGATTG GTGAGGCATC AGTGATTTAT
GCGAGCACCC TTAAGACAGT GGTTTACGAT TTTAGGACTA ATGATGTTGC CGCAGGTGGA
TTAGGTGCAC CATTAATAGC GTTAAGTGAT GCCTTAATCT TCAGTGAGGG GACATTAACC
ATAAACATTG GTGGGATATC GAACGTGACT TACATTGGGG AAGGCAGGGT GATGGCGTTC
GATACAGGAC CTGGTAATAT TCTAATTAAC TTGTTAACCG ACTACTTCTA CAATGAACCC
TACGACAAGG ATGGTTTACA CGCATCCAAT GGTCGCGTAA TTAAGGGGTT AATCAATGAG
CTAATGCAGG ATGAGTACTT TAAACAACCA CCCCCTAAGA ACACTGGTAG GGAGCACTTC
GGGTTAAATT ATGTGAGGAG TAGGGTACTG CCGTATTTAG GTAGGTATTC TAGGGATGAC
TTAATCAGGA CTATTACAAG GTTCACCGCT GAGAGTATTT ATGATCAGGT AAGGCGTTTC
ATAAATGGGC CCATTAGGGA AGTGATCATT GGTGGTGGAG GTATTAGGAA TCCTGTCTTA
ATGGGTGATT TAAGGGAATT ACTGGGTGAA TTAACGCCTA GGGTCGCTTC ATTTAAGGAT
CATGGTATAG ATGACTTAGC CAGGGAGGGG TTAGGCTTCG CCATAATTGC TAATGAGACG
CTTCACCTTA GGGTTGGCAA TACTGAGGCA ACTGGGGGTT CTCCAATTAT ACTTGGGAAG
ATAATACCAG GCGTCGACTT CATGGATATA ATTGAGCGTT TAAGGAACGA TGAATGCAGT
GGTTAA
 
Protein sequence
MRFLSIVTGT SSDGADASLI DLKGCGKATK FKIIKYTSFS YPEGLRRELL RVSSLERITA 
EEFSRVHWDL GRFLAGSVVG SFNKSEYDII AYSGYTVYHG PALGRRDYGT LQIGEASVIY
ASTLKTVVYD FRTNDVAAGG LGAPLIALSD ALIFSEGTLT INIGGISNVT YIGEGRVMAF
DTGPGNILIN LLTDYFYNEP YDKDGLHASN GRVIKGLINE LMQDEYFKQP PPKNTGREHF
GLNYVRSRVL PYLGRYSRDD LIRTITRFTA ESIYDQVRRF INGPIREVII GGGGIRNPVL
MGDLRELLGE LTPRVASFKD HGIDDLAREG LGFAIIANET LHLRVGNTEA TGGSPIILGK
IIPGVDFMDI IERLRNDECS G