Gene Cmaq_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1202 
Symbol 
ID5709798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1266861 
End bp1267994 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content44% 
IMG OID641275706 
ProductGMP synthase domain-containing protein 
Protein accessionYP_001541019 
Protein GI159041767 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.848628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00267313 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCACCC CCGAGGAATT CATAAGAACC ATTACAGGAG AGGTACGGAA ACTTGAGGTT 
AAGTGCGCCG TCGCCGCGGT GAGCGGCGGT GTGGATAGCA CCACCAGTGC CGTGGTTGCT
AGATTAGCCC TTGGTGATAG GTTAATACCA GTGTTGTTTG ATACAGGATT CATGAGGCTT
AATGAAACCA GTGAAATAAT TAACAGTTTA ACTGAATTAC TACCTATTAG GCTTATTGAT
GTTAAGGATG AGTTCTATAG GGCAATGATT AATTTAAGTG ATGCCGAGGA GAAGAGGCTT
ACCTTCAGGA ACGTTTTCTA CAATGCATTA TCAAGGGTGG TTAAGGATAA TGACTGTGAC
TGGGTTGTAC AGGGAACAAT AGCCCCTGAT TGGATTGAAA CCACAGGGGG CATTAAGACT
CAACATAATG TACTTGCCCA ATTGGGTATT GAGACCGATA AGGTTTACGG ATTCAAGCTA
CTGGAGCCTC TGAAGGATCT TTATAAGGAT CAAGTGAGGG CACTTGCAAG ATACTTGAAG
ATACCCAGTG CAATAACTGA GAGGCAGCCC TTCCCTGGCC CTGGCTTAAG CATAAGGGCT
GTGGGTAAGT TAACCATGGA GAAGCTTGAG GTCACCAGGT GGTCAACCAG GGTTGTTGAG
GAGGGGCTTA GTGGCTTAGG TTTAAGTCAA TGGTTTGCAG CCGTCTGGGA GGATGATAGG
GTTACTGATG AAGAGTTAAG CAGTGTGATT AGGGGAATGG GTGAGAACTT AACGGTTGAC
GTGTTCAGCG TTAAGGGTAC TGGAGTTAAA GGTGATTCAA GGGAATACGG TAGAGTGGTG
TTGGTTAGGG GTAAGTTAAG TAACTGGAGT AATGCCTTTA CCCTATACAG TAAATTAACC
TACGGCACCA ACGTAACCCA CGTGATTTAT GAATTAGCCA GGAGGAGGCC TAGCGGTGGA
TACTTCGTTG CAGTAAGGGC TGTGGTAACT GATGACTACA TGACGGCTAA TGTACCTACA
CTTAATGAGC AATTATTAAG GAATATAGCT AATGAATTAA TGAGAAGTGA ATTAATTAGC
GCCGTAGGAA TTGATGTAAC CCCAAAACCA CCAGCAACAA TAGAATTTGA GTAA
 
Protein sequence
MFTPEEFIRT ITGEVRKLEV KCAVAAVSGG VDSTTSAVVA RLALGDRLIP VLFDTGFMRL 
NETSEIINSL TELLPIRLID VKDEFYRAMI NLSDAEEKRL TFRNVFYNAL SRVVKDNDCD
WVVQGTIAPD WIETTGGIKT QHNVLAQLGI ETDKVYGFKL LEPLKDLYKD QVRALARYLK
IPSAITERQP FPGPGLSIRA VGKLTMEKLE VTRWSTRVVE EGLSGLGLSQ WFAAVWEDDR
VTDEELSSVI RGMGENLTVD VFSVKGTGVK GDSREYGRVV LVRGKLSNWS NAFTLYSKLT
YGTNVTHVIY ELARRRPSGG YFVAVRAVVT DDYMTANVPT LNEQLLRNIA NELMRSELIS
AVGIDVTPKP PATIEFE