Gene Cmaq_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1175 
Symbol 
ID5709368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1233599 
End bp1234639 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content48% 
IMG OID641275676 
Productalcohol dehydrogenase 
Protein accessionYP_001540992 
Protein GI159041740 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.518707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCTA GGGCCTTAGT CCTAAGGGAA TTCAGTGGGA GGCTTAGGCT TGAGTCCATT 
GATGTTAAGG AACCCGGTAA TGATGAGTCA GTGTTAGTTA AGGTTATTGG AGCTGGAATG
TGTAAGACAG ATGTTAGGCT ATGGAAGGGT ACTGAGCCTA GGGAGGGCTT TAAACTACCC
TTCGTCCTAG GTCATGAGAA CGCGGGCATA GTGGAGGAGG TTGGGGGTAA GGTTAAGGGG
CTTAAGCCGG GGGATAAGGT ACTTGTATAC GCAATTTGGG CTGACCCAGG CTGCAAATAC
TGTAGGGTGG GTAAGTGCAT GCAGTGTAGG GATCAAAGCA TACCAGGTCA ATCAAACTAC
TACGGTGGGT ATGCGGAGTA CCTTTACGTA CCGGATTACA GGTATTTAGT GAGGATAGAC
ATTGATCCAG TTGAGACAGC CCCCTTAGCT GACGCTGGTT TAACATCATA CTCAGCGGTT
AAGAAGAGTA TACCGTATCT TTACCCAGGT TCACTGGTGA TAGTTTACGG TATGGGTGGC
TTAGCCTCAT ATGCAGTGCA GTACCTTAGG AAAATGACCC CATACGTCAC CGTTGTGGCC
GTATCGAGGA GTGATGATAA GCTTAAGTGG GCTGAGGAAT TAGGCGCCCA CTATGCCGTT
CACCCAAGTG AATTAGCCAG TATTGTTAAG AGCGTCAGCA CTGATGGTGC CTCAATTCTC
CTCGACTTCG TTGGCAATGA GGAGTCCGCT AAGGCAGTGT CATTACTTGA GCCGGGTGGT
GCAGTGGTGT TGGTTGGCAT GGAGGGTAAA TCATACCCAA TCCCCGTCTT CGATACTGTT
GCCTGGCAGT ACACGGTTAT TGGGAGTAAT TACGGTAGTA TTAATGAGAT GGAGGAGATG
GTTAAGTTCA TTAAGGATCA TGGGGTTAAG TCATATATTG AGAAGATACC GTTAAGCGAG
GGGGATGTTA ACGATGCCTT AGTTAAATTA AGTGAGGGTA AGGTGCTTGG AAGATTCGTG
ATAACACCAT GGGGTGGTTA A
 
Protein sequence
MRARALVLRE FSGRLRLESI DVKEPGNDES VLVKVIGAGM CKTDVRLWKG TEPREGFKLP 
FVLGHENAGI VEEVGGKVKG LKPGDKVLVY AIWADPGCKY CRVGKCMQCR DQSIPGQSNY
YGGYAEYLYV PDYRYLVRID IDPVETAPLA DAGLTSYSAV KKSIPYLYPG SLVIVYGMGG
LASYAVQYLR KMTPYVTVVA VSRSDDKLKW AEELGAHYAV HPSELASIVK SVSTDGASIL
LDFVGNEESA KAVSLLEPGG AVVLVGMEGK SYPIPVFDTV AWQYTVIGSN YGSINEMEEM
VKFIKDHGVK SYIEKIPLSE GDVNDALVKL SEGKVLGRFV ITPWGG