| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1166 |
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| Symbol | |
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| ID | 5709429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1224000 |
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| End bp | 1224917 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641275667 |
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| Product | RNA polymerase insert |
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| Protein accession | YP_001540983 |
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| Protein GI | 159041731 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCATG TGGTATCAGT TAAGGTTCTC CAGTACAGTG ATGATTACTT GAAATTCGTG
GTGGAGGGTG TTAAGCCAAG CCTAATTAAT TCACTTAGGA GGATACTGAT CACTGATGTT
CCTGTATTAG CCATTGATAG GGTTATTGTC CTAGATAACA CCACGGTAAT GTATGATGAG
GTTCTTGCCC ATAGGCTATC AATGATTCCG CTTAAGACTA ATCTAGAGAA GTTACCTAAG
ATTGAGGAGT GTGAGGATGA GTTAGTTGAC CCAAGCCTAT GCCAGGTTAG GTATCAGTTG
AGTATTAAGG CTAATGACCA GGTGGTTTCC GTTTACGCTA AGGATTTAAT CCCAGATGAC
CCAGACTTCG CCCCAGTTTA CCCAGATACA TTAATAGTTA AGATGAGTAA GGGCCAAGTA
CTCTCCATTG AGGCTTACGC CAAGTTAGGT AGGGCTAGGG ATCACGCCAA GTGGCAGGCA
TGCTTAGCAT CATACTACTA CTACCCGAAG GTTCAGTTAC TTAACCCAAG GGATGAGAGG
TGCGCCGCAT GCCTTGAATC ATGCAAGGGG ATTACTAGGA AGAATGATGA ATACGTCATA
ACGGATCCTC TTCAATGCAC CTTCGATAAC TGGAAGACAT GCGAGGAGGC GTGCAGCGGC
TCACTGGTGG TGGATTGGGA TGAGGATAAG TACGTCTTCT GGGTTGAGAA CTACGGTAAC
ATGAGTATGG TGAATCTACT TAAGGAGGCC TTCAGGGTGT GGAAGTGGCG CTTCACCACT
TTCCTTGACG TTATACGCAA TGAGGCTAAA AGACAGGCAG CAAGGCCAAG TGAATCAAGT
GAAGCCGAGG GTCAGGGGGA TACGGGTAAT AATCAAACCC AGGCCACTGA TGAGGGTTTA
AACCAGGCTC AGGGTTAA
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| Protein sequence | MGHVVSVKVL QYSDDYLKFV VEGVKPSLIN SLRRILITDV PVLAIDRVIV LDNTTVMYDE
VLAHRLSMIP LKTNLEKLPK IEECEDELVD PSLCQVRYQL SIKANDQVVS VYAKDLIPDD
PDFAPVYPDT LIVKMSKGQV LSIEAYAKLG RARDHAKWQA CLASYYYYPK VQLLNPRDER
CAACLESCKG ITRKNDEYVI TDPLQCTFDN WKTCEEACSG SLVVDWDEDK YVFWVENYGN
MSMVNLLKEA FRVWKWRFTT FLDVIRNEAK RQAARPSESS EAEGQGDTGN NQTQATDEGL
NQAQG
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