Gene Cmaq_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1157 
Symbol 
ID5709807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1213470 
End bp1214183 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content45% 
IMG OID641275656 
ProductABC transporter related 
Protein accessionYP_001540974 
Protein GI159041722 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCAAC GTAACGCTCT AGTTGAATTC AAGGACGCCT ACCTGGGTTA CGGGTCAAGG 
GTAGTGGTTA AGGGGTTGAA TTTAACCGTG GGTGAGGGGT TAACGGTACT GCTTGGTCCT
AATGGGAGCG GGAAGACAAC GATAATGAAG GCAATATTCG GTTCAGCAAG GGTCATTAAG
GGTTGGCTTA GGGTTAATGG CTCAGTAACC TACGCTCCCG CAGAGGTTGA TGGATTAATC
AACTTAACGG TACTGGAGAC TGTTAAGACG GCTAGGAGGG GGTATGGTTG GGTTAGTGAT
GAGGATGCCA TGGATGCTTT AATGAGCGTG GGCATAGTCG GTATCAGTAA TATGAGGCTT
AGTGAATTAA GCACTGGTCA AAAGAGGTTA ACAATGATTG CAAGAGCCAT AGCCAGTAAC
GCTGACTTAA TGCTAATAGA TGAGCCAACA GCCAACCTAG ACCCAGGTAA TAGGTACAGG
ATGATTAAGG TTATACGTGA ACTAGCTAAT AAACATGCAG TAATGGTTGC GACGCATGAC
GTTGATATTG CGCTTACAGC GAATCAAGTG GTTATGATAA GGGATGGAAA CGTGATAGGC
GTGGGGGAGC CGGGTAGAGT ATTAACTGAG GAGAGGTTAA CTCAATTATA CGGTATAGTG
GTTAAGTTAA TTAAGCATAA TGATGAGGTT CATGTAGTAT TCCCAGTGAG TTAA
 
Protein sequence
MPQRNALVEF KDAYLGYGSR VVVKGLNLTV GEGLTVLLGP NGSGKTTIMK AIFGSARVIK 
GWLRVNGSVT YAPAEVDGLI NLTVLETVKT ARRGYGWVSD EDAMDALMSV GIVGISNMRL
SELSTGQKRL TMIARAIASN ADLMLIDEPT ANLDPGNRYR MIKVIRELAN KHAVMVATHD
VDIALTANQV VMIRDGNVIG VGEPGRVLTE ERLTQLYGIV VKLIKHNDEV HVVFPVS