Gene Cmaq_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1134 
Symbol 
ID5708888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1191168 
End bp1191863 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content39% 
IMG OID641275633 
Producthypothetical protein 
Protein accessionYP_001540951 
Protein GI159041699 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.324615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTT ACGTAGGCAC CTCAGGTTGG TTATATGATT GGAATAAGGG GCGTTCACTG 
GATTGGTACG TTAAGTATAG TGGGTTGAAT GCAGTTGAGT TGAATTCATC ATTCTATAGG
TTACCTAAAC CCACTATGGT TAATTCATGG GCTAGTAAGG CTTCAGCATT AAGATGGTCT
ATTAAGGCTT ATAGGTACAT TAGCCATGTG GCTAAGCTTA GCGGTAATGC CCCTGAATGG
TGGCGTAAGA TGATTGAGTT ATTTAAGCCG CTTAACAATA GCATCGACTT CTACTTAATT
CAACTACCTC CATCATTCAA GTACAGTAGC GATAACTTAA GTAGACTTCA CGACTTCATA
AGTGAAATAG GAGGTGGTGA GAGAATTGCG GTTGAGTTTA GGGAGCGCGG TTGGTTTAAT
GATAGCGTGG TTAATTCAAT TAATGAACTT GAAGTCACAA TGGTATCCAT AGACTCCCCT
GAAATTAAGT GGATAGGATC AAGTAATGGT GTTGTTTACT TGAGGATGCA TGGGAGGAGT
AATTGGTACT TCCACAATTA CAGTGAGGGT GAATTAATTG AGGTGGCTAA GGTTATTAAA
TCCCTTAATC CAATTAAGGT TTACGTATTC TTTAATAATG ACCACTGGAT GCTGGAGAAC
GCTAAGGCAA TGTTAAGCAT TTTAAGAAAC CTTTAA
 
Protein sequence
MEIYVGTSGW LYDWNKGRSL DWYVKYSGLN AVELNSSFYR LPKPTMVNSW ASKASALRWS 
IKAYRYISHV AKLSGNAPEW WRKMIELFKP LNNSIDFYLI QLPPSFKYSS DNLSRLHDFI
SEIGGGERIA VEFRERGWFN DSVVNSINEL EVTMVSIDSP EIKWIGSSNG VVYLRMHGRS
NWYFHNYSEG ELIEVAKVIK SLNPIKVYVF FNNDHWMLEN AKAMLSILRN L