| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1133 |
|---|
| Symbol | |
|---|
| ID | 5709502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1190094 |
|---|
| End bp | 1191107 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275632 |
|---|
| Product | diphthamide biosynthesis protein |
|---|
| Protein accession | YP_001540950 |
|---|
| Protein GI | 159041698 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
|---|
| TIGRFAM ID | [TIGR00322] diphthamide biosynthesis protein 2-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.45882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTGG AGAATGTGTT GGTGGAGGGT ATTGATGAGT TAAGGGGGAT TATTAATGAT
AGAGTGATGA TTGAGGCGCC AATAGGTCTT AATAATATTG CAGTGAAGTT ATCGAAAATA
ATTATTGAGA AGTATGGTGT TAAGGAAGCA GTAGTAAGCG GTAGGAATGC CTGGGGGGCA
TGTGACATAA CCACTCCACC GCCTGGCTTC GACATTATAC ACATTGGTCA TGCGTTACCC
CCGAATATTG AATCATTAAT GAGGATTAAT GGCTATGTGA TTGAGAAGAA CGGTGAAAAG
GCAGTTATCA CTGGTAAGGG GTTTAAGGCA TATATCCTAC CAGCCTACTA CATGCCTAAT
GATGGTGTCG TTGAGGCTTT AGTCAAGGGC CTACAGGGGT ATGAGGGTTC ACTAGTCCTT
TACCCAATCC TATACAAGCT TTACGCGGAG TCAGTGGCTA GGGGGATACG TGGAGCCGCG
GTGGGGCCGT TCACAGGATG CTTCATGCCC ATTAGGGCTA ATAGGATTGT GGTGGTTTCA
GGGGGTTACT TCTATGCGTT AACAGCTAAG TTAATTAACC CAGGTTCAAG GGTAATGGTG
GCTGATCCAC ATAGGGTTGT GGTTGAGGAT GTGGAGTCGG TTTACAGGAG GTACATTGGT
TTAAAGGTTA ATTCACTGTT AAGGGCTATT GATGCGAGGA GGATAGCCAT ATTATTAACC
AGTAAGCCTG GTCAAGGCAA CATTAATCAT GCCTTAAGCG TTAAACGTAG GTTACAGCAG
AGTGGGAGGG ATGCCTTCAT ACTCTACGTT GATGAGGTCT CAGCTGAGGC TATAAATAAT
ATTGATGCTG ACGCAGTTGT TATTGAGGCT TGTCCGAGAA TAGCCTTAGA TGACTTAGAT
AGGGTTAATA AACCACTCAT AGCGCCGCTT GAGGTGAATT ACATTATTAA CGGTAAGATA
AGTGAATATA AGGCAGCTGC AGCAACATTG ATACCGCTTA ATAGTGGGTA CTAG
|
|---|
| Protein sequence | MIVENVLVEG IDELRGIIND RVMIEAPIGL NNIAVKLSKI IIEKYGVKEA VVSGRNAWGA
CDITTPPPGF DIIHIGHALP PNIESLMRIN GYVIEKNGEK AVITGKGFKA YILPAYYMPN
DGVVEALVKG LQGYEGSLVL YPILYKLYAE SVARGIRGAA VGPFTGCFMP IRANRIVVVS
GGYFYALTAK LINPGSRVMV ADPHRVVVED VESVYRRYIG LKVNSLLRAI DARRIAILLT
SKPGQGNINH ALSVKRRLQQ SGRDAFILYV DEVSAEAINN IDADAVVIEA CPRIALDDLD
RVNKPLIAPL EVNYIINGKI SEYKAAAATL IPLNSGY
|
|---|
| |