Gene Cmaq_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1075 
Symbol 
ID5710374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1126230 
End bp1126460 
Gene Length231 bp 
Protein Length76 aa 
Translation table11 
GC content47% 
IMG OID641275575 
Productzinc finger CDGSH-type domain-containing protein 
Protein accessionYP_001540894 
Protein GI159041642 
COG category[S] Function unknown 
COG ID[COG3369] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0134268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.413778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGGC TAGTTATACA TACGGCTAAG AAACCATACG TATATAAGCT TCCCAGCGGG 
GAAACAGTAG CCATATGCAT GTGTGGGCTG AGTGATAAGT ACCCGTTCTG CAGTGGGAAG
CATAAACTAG TGCAGGATGA GGATGATGCC AAGGTCTACA CGTATGATGA AACAGGCTAT
AAGAGGCTGG GTGAAGCCAG CATTGATGCT AGGGGATTAA GGAGGGTTTA A
 
Protein sequence
MARLVIHTAK KPYVYKLPSG ETVAICMCGL SDKYPFCSGK HKLVQDEDDA KVYTYDETGY 
KRLGEASIDA RGLRRV