Gene Cmaq_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1044 
Symbol 
ID5710180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1094809 
End bp1095450 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID641275544 
ProductN-(5'phosphoribosyl)anthranilate isomerase (PRAI) 
Protein accessionYP_001540863 
Protein GI159041611 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00000049019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACTCTGC TTAAGGTTTG CGGATTAACG AGGAGGATTG ACGTAGAGTT CATTGATAAG 
CACGCCGATT ACGCAGGCTT CATAATTCAC TCAGATGTTA AGACCCAGAG GCTACTGAGC
CCCAATGAGG CTAGGGACTT GGCTTCAACA CTCTCCAAGG CTAAGCCAGT GGCCGTGGTT
AGGGGATTGG GGTTAAGGGA CGCAGTGGAG TTGGCTACTG GCTTAGGCTT CCCAATCCTA
CAGTACCACG GTGTGGTTAA CGTTGATGAG TACCTTAGTG GACAGGGTAA CATTAACCTT
GCACCAGTAA TTGAGTATAG TGACGATTCC ACCGTAGTGA AGACTATTGA GGAGTACTTA
ACCATGAGTA ACGTGGAGTA CATCCTCATT GACGCCCCTA AGGCTGGTTA CAGGTTATTT
GAATACGGTT TGAAAATACC ACTAAGCATT ATTAGGCGTG TCGTGGGTTT AAGCAGGATT
GGTGTTGCTG GGGGTATTGG GCCAGGTAAC GTTAAGTTCA TTATTAAGTA TAATCCATTT
TTAATAGATG TTAATTCAGG GGTTGAATCA AGCCCCGGTG TTAAGGATTG GAGACTAATC
ATGGAGGTTG TTAAGGTGAT TAAGGGTGAA GGTGCCCCTT GA
 
Protein sequence
MTLLKVCGLT RRIDVEFIDK HADYAGFIIH SDVKTQRLLS PNEARDLAST LSKAKPVAVV 
RGLGLRDAVE LATGLGFPIL QYHGVVNVDE YLSGQGNINL APVIEYSDDS TVVKTIEEYL
TMSNVEYILI DAPKAGYRLF EYGLKIPLSI IRRVVGLSRI GVAGGIGPGN VKFIIKYNPF
LIDVNSGVES SPGVKDWRLI MEVVKVIKGE GAP