Gene Cmaq_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1016 
Symbol 
ID5710045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1066731 
End bp1067585 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content42% 
IMG OID641275517 
Productglutamine amidotransferase-like protein 
Protein accessionYP_001540837 
Protein GI159041585 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.42516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTTG ACTTAATCAT GTGTAGGTTC GCGGCTTTAA CCGTAAGTGA CCCTGTCTTG 
GTTAAGGAGA CTTTGCTCAA GCTTAAGGAG GCAGCTAGGG TGGATCCAAT GGGGCCCAGT
GGTGTGGTGG ATCACAGTGA TGGATGGGGT TTAGCGGTAA TGCAGGGTAA CCCTAGGGAC
GGTGTCCTCA CATTATATAA GGCCACTAAA CCCATTTACA GTGACTCAAG CTTCAACACT
ATGCTTGAAT TGATTACGCA ATCAAAGGGT GTGGTTTACA GTGGTGTGGT GCATGTGCTT
AACGCCGATG ATAAGAGCGT GGTTAACACA ATAACAGTGC ACCCTGTTAA TGCACAGGTT
AGTGATGGGG AATTATACCT GGTTCATAAT GGTGTTGTGG ATAAGTTTAA GGTTTACGAA
TACTTACGGA GTAAGTACGG TGTTAGGCTT AGGGTTGAGT TAATGAACGA CACGTACGTA
CTAGCTCAAT TACTAGCTAG AATCTACGAT GACACCGGTG ACTTAAGTCA TGTATTAAGT
AGGTTAGCCG GCTTAATTAG GGATGGTAAT TGGCTTAAAT CAGCGTTAAA TACCGGGATT
CTACTTATTA AGCCAAGCGC CGTTAACGTA TACGTAACTT CAATGTACAG TTCAAGTGTT
TTAAGCAATG AGAAGAGGAG GAAGTACTAT AACTTATTCA TGATTAAGTC AAGTCTAGGT
GCAGTAATGG CATCCAGTAC ACTTATTAAG GCATATGGCC TAGGTAATGG TACTGTTGAT
GAGGTTGAGC CTAAGGGTAA TGAATTAATA CAATGTGAAT TAAGCCTAAA CTCCATTAAC
TGCCAGGAGG CTTAA
 
Protein sequence
MLVDLIMCRF AALTVSDPVL VKETLLKLKE AARVDPMGPS GVVDHSDGWG LAVMQGNPRD 
GVLTLYKATK PIYSDSSFNT MLELITQSKG VVYSGVVHVL NADDKSVVNT ITVHPVNAQV
SDGELYLVHN GVVDKFKVYE YLRSKYGVRL RVELMNDTYV LAQLLARIYD DTGDLSHVLS
RLAGLIRDGN WLKSALNTGI LLIKPSAVNV YVTSMYSSSV LSNEKRRKYY NLFMIKSSLG
AVMASSTLIK AYGLGNGTVD EVEPKGNELI QCELSLNSIN CQEA