| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0989 |
|---|
| Symbol | |
|---|
| ID | 5709384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1042311 |
|---|
| End bp | 1043345 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641275490 |
|---|
| Product | Ion transport 2 domain-containing protein |
|---|
| Protein accession | YP_001540810 |
|---|
| Protein GI | 159041558 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.369667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATTA TACAATTGAA TGTGTATAGG CTAATGAGGA GGATTAGGAG AGTGTTGAGA
AGCCTAGTAG TTTACGTAAT ATTAATGTTT ATGGCTGTGT TGTTCATAGG TGCATTAGGC
ATTTATCTGG TTGAGCATGG TCATAACCCT GGTATTAGGA ACTTTTTCGA TGCCATTTGG
TTCGTCATGG AGACTATAAC CACCGTGGGT TACGGGGATA TTGTTCCTCA AACCACTGTG
GGTAGGGTTT TGGATATGGT TATAATGCCA ATTGGTATAG CGGTAATAAG CATATTAACA
GCATCAATAG CCACCTTATT AACTGAGAGG GCTATGGAGA AGATGGGTGG TATGAAGTCA
AGCAGTAAGG GTAATCATGT GGTTATTCTG GGTGAGCCTG AGAGGGCTAT CAACTTAATT
AAGGCTTTGA TTAAATTAAT GGATGAGTCA GGTAAATTCA TTGATATAGT TTACGTAAGT
GAATTTGAAA AACCACCTAA CTTACCTAAG GATGTTGAAT TCATTAAGGG TAACCCAACG
CTTAAGGATA CTTTAATTAG GGCTAATGTT GATAAGGCAT CATCACTAAT AATCCTACCC
CAGGGGGATT CTGCTTCAGC GGATGCTAGG ACACTTATGG AGGTTGTGGT GGCTAGGAGC
ATTAACCCAA GCCTCTACAT AGTGGCTGAG CTCCTCAATG AGGGTAATGC GGAGTATGTA
CTTAAGGCTG GAGCCGATGA AGCAATAGCC GTGGGGTCAT TAACAACAAT AGCTATGGCG
AATGAAATCA TTTATAGGGG ATCATTAAAG GCAATAATGA GGCTACTTAG AGGTAACAGT
GAAATCTTAG TTATTAACTC AAGCAAGTAC ACTGGGTTGA GTTTCAAGGA TGCCCTCATT
AGGGTGAGGG AAGATGAGTC GGGAATACTC ATTGGTGTTC TCAGAAATAA TGAGGTGTTA
ATAAGCCCAA GTGATGAACT AATTATTAAA CCAGGTGATG AATTAATAAT AATTAAATCA
ATGAACATTA AGTAG
|
|---|
| Protein sequence | MPIIQLNVYR LMRRIRRVLR SLVVYVILMF MAVLFIGALG IYLVEHGHNP GIRNFFDAIW
FVMETITTVG YGDIVPQTTV GRVLDMVIMP IGIAVISILT ASIATLLTER AMEKMGGMKS
SSKGNHVVIL GEPERAINLI KALIKLMDES GKFIDIVYVS EFEKPPNLPK DVEFIKGNPT
LKDTLIRANV DKASSLIILP QGDSASADAR TLMEVVVARS INPSLYIVAE LLNEGNAEYV
LKAGADEAIA VGSLTTIAMA NEIIYRGSLK AIMRLLRGNS EILVINSSKY TGLSFKDALI
RVREDESGIL IGVLRNNEVL ISPSDELIIK PGDELIIIKS MNIK
|
|---|
| |