Gene Cmaq_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0967 
Symbol 
ID5708759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1015283 
End bp1017295 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content44% 
IMG OID641275468 
Producthypothetical protein 
Protein accessionYP_001540789 
Protein GI159041537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0307045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTA GAGGGAAGTT ACTTGGAGTA GTGGCGATAG TGATAGCGGG TTTAATACTA 
TACGGTACGG CTATTTACCT AGCCACTGCA ACCCAGCAGG CAACCCCGAC TCAAAACCAA
GCAGTATCAA TCACCCTACC CTACTATGCT GAGGTTCAGT ACATTGATGT GATTAACCAG
ACTGTTCAAT TATCAATACC TGCAGGAGGC ACCTACACGG TCACTGCACC ATTACCCCCG
GGTCCAGGCT ATAGTTTAGA GTACCTTGAG GTTTACTTCC CCACACCTCT TCCATCAATA
GGTGTTTCAG GTAATATACT GAAGAGTGTT AATGAGTACG GCTTCATAAC CTCAGTTTAC
TCACCATCAG GCTCAATAGT ATTGGTTAAT TCAGGTCAGA ACACTGTTAA CGGTACAATA
GTTGTTTCAT CAGTCTTCGT TAAAACAATC TACGTACCCT TAACTAACCA GTCATCAATA
AACATAACTG CACCGGACTA CACCTACCAG TACGTTACTG ACCAGTACGT GGAGTTAACA
ATACCAAATA ACGCGCCCTT CAGTGTGAAG GATGTTGTGC TACCCAACGG TAGTGCCTTC
AGTCAATTAG TTGAGAAGTG GAGTGGTAAT GTTACTGCTA TTCAATTAGA CTACAAGCAT
ATTAAGCTTG ATATGGCTTA CTTACCCTCA GGTAACTATA GTGTTGAATT ACTTCAAGGC
TCACAGTACG AGATGCCCTT CGCAATGCTG GTTAAGGGTA CTCAATTCTA CAACACCACT
GTTGATGCCC ATAGTCAAGT CATAATAACC ACTAATAATT TCGGAATACC CTCAGGCTGG
TCAATAATGG GTTACGTGGT AACGGTCTAC ACGGTTCAGC CACTGGTGGT TGGTGAAACA
GGTGGTACAT TCATTGTGGA GGCTAATAGG GTTTCACCAG TATACACGCT GAGTCAGCTT
ATTGTGGTTC ATGGTGTTAG CTACATACTA CCACCCTTCA TAAGATTCAT GCCAATCATT
GGGATTTACG TAATATACGA TACTCAATTC AAGGTAGTTA ACCCACTGAA CGTGCCAGTC
ATTGTTGAAT ACATGCCGAT AATCTATAAG CCTGTTGGTC AATGGAGTAA TGGTAACCTG
CAGGTTCAGG TTTACCAGAG TGATGTGGCT CAAGGTATGT GGACGTCACT AGTTGTTCAA
CTACCTGAGA CCGCAACAAT AACCAGTATA GTTACCCCAA GCGGCACCAC TTACAGTGGT
TACACCTCAT CAGAGTTGCC GTGGGGTAGT GAGTTCAGGT TGATATCAAT ATCACCGGAT
GGTCATGAAG CTTACATTGC AGTAAGCACA CTGGGTGTAT CTCAGCCAGG CCTCTACACG
GTTAACGTGC ATTGGGATCC ATTAATAGTT AGTGTTCATA ACACCTATGG TTCACCAGTG
AGTGCTGTGG TTGCTGCGTC ACAGAATGGG CAGGTTTACG GCACCTTCAA CACTAATGCA
AGCGGCATAG CTCTAGTGAG TGTAAGCAAC CCGTACCCGG TTTCATTATC AATATACTAT
GAGGGTGTTG ATGCATATAA CATTGGAGTC ACGACACTAA TTAAGAGGCC AATAGATGTG
ACTCTAGGAG TCTACAATGT AACAGCCATA GTTGTCGGTT TCTTCAACCA GGCAATTAGT
AAGGCTAACG TAACCATGTA TAGGATTGGT ACTGGGCCGG TTTACTCACA GTTAACTGGG
CCAAACGGTG CCACTCAATT AAACGGAGTC TTAACAGGTG TCTACCAGTT AACCGCCTCA
TATGGTCATG CCAAGTACAG TAAATTCCTA ACTGTTGATT CTGATGAGGT GGCTTTAATT
AAGACCAATA TATTAACCAT AATAAATGGC TTCCCAATAA CGACCGGTGA TGCAATAATT
GGGGCCGTTG GTATACCTGC CATTGCTGGG GTTGCATACG CAATTAAGAG TCTAGTGGAT
AGGAGGAGGC CTTATCACGT TGAGACCACG TAA
 
Protein sequence
MSFRGKLLGV VAIVIAGLIL YGTAIYLATA TQQATPTQNQ AVSITLPYYA EVQYIDVINQ 
TVQLSIPAGG TYTVTAPLPP GPGYSLEYLE VYFPTPLPSI GVSGNILKSV NEYGFITSVY
SPSGSIVLVN SGQNTVNGTI VVSSVFVKTI YVPLTNQSSI NITAPDYTYQ YVTDQYVELT
IPNNAPFSVK DVVLPNGSAF SQLVEKWSGN VTAIQLDYKH IKLDMAYLPS GNYSVELLQG
SQYEMPFAML VKGTQFYNTT VDAHSQVIIT TNNFGIPSGW SIMGYVVTVY TVQPLVVGET
GGTFIVEANR VSPVYTLSQL IVVHGVSYIL PPFIRFMPII GIYVIYDTQF KVVNPLNVPV
IVEYMPIIYK PVGQWSNGNL QVQVYQSDVA QGMWTSLVVQ LPETATITSI VTPSGTTYSG
YTSSELPWGS EFRLISISPD GHEAYIAVST LGVSQPGLYT VNVHWDPLIV SVHNTYGSPV
SAVVAASQNG QVYGTFNTNA SGIALVSVSN PYPVSLSIYY EGVDAYNIGV TTLIKRPIDV
TLGVYNVTAI VVGFFNQAIS KANVTMYRIG TGPVYSQLTG PNGATQLNGV LTGVYQLTAS
YGHAKYSKFL TVDSDEVALI KTNILTIING FPITTGDAII GAVGIPAIAG VAYAIKSLVD
RRRPYHVETT