Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0967 |
Symbol | |
ID | 5708759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1015283 |
End bp | 1017295 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275468 |
Product | hypothetical protein |
Protein accession | YP_001540789 |
Protein GI | 159041537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0307045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTTA GAGGGAAGTT ACTTGGAGTA GTGGCGATAG TGATAGCGGG TTTAATACTA TACGGTACGG CTATTTACCT AGCCACTGCA ACCCAGCAGG CAACCCCGAC TCAAAACCAA GCAGTATCAA TCACCCTACC CTACTATGCT GAGGTTCAGT ACATTGATGT GATTAACCAG ACTGTTCAAT TATCAATACC TGCAGGAGGC ACCTACACGG TCACTGCACC ATTACCCCCG GGTCCAGGCT ATAGTTTAGA GTACCTTGAG GTTTACTTCC CCACACCTCT TCCATCAATA GGTGTTTCAG GTAATATACT GAAGAGTGTT AATGAGTACG GCTTCATAAC CTCAGTTTAC TCACCATCAG GCTCAATAGT ATTGGTTAAT TCAGGTCAGA ACACTGTTAA CGGTACAATA GTTGTTTCAT CAGTCTTCGT TAAAACAATC TACGTACCCT TAACTAACCA GTCATCAATA AACATAACTG CACCGGACTA CACCTACCAG TACGTTACTG ACCAGTACGT GGAGTTAACA ATACCAAATA ACGCGCCCTT CAGTGTGAAG GATGTTGTGC TACCCAACGG TAGTGCCTTC AGTCAATTAG TTGAGAAGTG GAGTGGTAAT GTTACTGCTA TTCAATTAGA CTACAAGCAT ATTAAGCTTG ATATGGCTTA CTTACCCTCA GGTAACTATA GTGTTGAATT ACTTCAAGGC TCACAGTACG AGATGCCCTT CGCAATGCTG GTTAAGGGTA CTCAATTCTA CAACACCACT GTTGATGCCC ATAGTCAAGT CATAATAACC ACTAATAATT TCGGAATACC CTCAGGCTGG TCAATAATGG GTTACGTGGT AACGGTCTAC ACGGTTCAGC CACTGGTGGT TGGTGAAACA GGTGGTACAT TCATTGTGGA GGCTAATAGG GTTTCACCAG TATACACGCT GAGTCAGCTT ATTGTGGTTC ATGGTGTTAG CTACATACTA CCACCCTTCA TAAGATTCAT GCCAATCATT GGGATTTACG TAATATACGA TACTCAATTC AAGGTAGTTA ACCCACTGAA CGTGCCAGTC ATTGTTGAAT ACATGCCGAT AATCTATAAG CCTGTTGGTC AATGGAGTAA TGGTAACCTG CAGGTTCAGG TTTACCAGAG TGATGTGGCT CAAGGTATGT GGACGTCACT AGTTGTTCAA CTACCTGAGA CCGCAACAAT AACCAGTATA GTTACCCCAA GCGGCACCAC TTACAGTGGT TACACCTCAT CAGAGTTGCC GTGGGGTAGT GAGTTCAGGT TGATATCAAT ATCACCGGAT GGTCATGAAG CTTACATTGC AGTAAGCACA CTGGGTGTAT CTCAGCCAGG CCTCTACACG GTTAACGTGC ATTGGGATCC ATTAATAGTT AGTGTTCATA ACACCTATGG TTCACCAGTG AGTGCTGTGG TTGCTGCGTC ACAGAATGGG CAGGTTTACG GCACCTTCAA CACTAATGCA AGCGGCATAG CTCTAGTGAG TGTAAGCAAC CCGTACCCGG TTTCATTATC AATATACTAT GAGGGTGTTG ATGCATATAA CATTGGAGTC ACGACACTAA TTAAGAGGCC AATAGATGTG ACTCTAGGAG TCTACAATGT AACAGCCATA GTTGTCGGTT TCTTCAACCA GGCAATTAGT AAGGCTAACG TAACCATGTA TAGGATTGGT ACTGGGCCGG TTTACTCACA GTTAACTGGG CCAAACGGTG CCACTCAATT AAACGGAGTC TTAACAGGTG TCTACCAGTT AACCGCCTCA TATGGTCATG CCAAGTACAG TAAATTCCTA ACTGTTGATT CTGATGAGGT GGCTTTAATT AAGACCAATA TATTAACCAT AATAAATGGC TTCCCAATAA CGACCGGTGA TGCAATAATT GGGGCCGTTG GTATACCTGC CATTGCTGGG GTTGCATACG CAATTAAGAG TCTAGTGGAT AGGAGGAGGC CTTATCACGT TGAGACCACG TAA
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Protein sequence | MSFRGKLLGV VAIVIAGLIL YGTAIYLATA TQQATPTQNQ AVSITLPYYA EVQYIDVINQ TVQLSIPAGG TYTVTAPLPP GPGYSLEYLE VYFPTPLPSI GVSGNILKSV NEYGFITSVY SPSGSIVLVN SGQNTVNGTI VVSSVFVKTI YVPLTNQSSI NITAPDYTYQ YVTDQYVELT IPNNAPFSVK DVVLPNGSAF SQLVEKWSGN VTAIQLDYKH IKLDMAYLPS GNYSVELLQG SQYEMPFAML VKGTQFYNTT VDAHSQVIIT TNNFGIPSGW SIMGYVVTVY TVQPLVVGET GGTFIVEANR VSPVYTLSQL IVVHGVSYIL PPFIRFMPII GIYVIYDTQF KVVNPLNVPV IVEYMPIIYK PVGQWSNGNL QVQVYQSDVA QGMWTSLVVQ LPETATITSI VTPSGTTYSG YTSSELPWGS EFRLISISPD GHEAYIAVST LGVSQPGLYT VNVHWDPLIV SVHNTYGSPV SAVVAASQNG QVYGTFNTNA SGIALVSVSN PYPVSLSIYY EGVDAYNIGV TTLIKRPIDV TLGVYNVTAI VVGFFNQAIS KANVTMYRIG TGPVYSQLTG PNGATQLNGV LTGVYQLTAS YGHAKYSKFL TVDSDEVALI KTNILTIING FPITTGDAII GAVGIPAIAG VAYAIKSLVD RRRPYHVETT
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