| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0937 |
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| Symbol | |
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| ID | 5709719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 983612 |
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| End bp | 984220 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641275438 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001540759 |
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| Protein GI | 159041507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAGTC AACCACTTCA CGTTAACGCT AGGACGACGG CAATAATAAT AATCATAAAT
AGTGTTTTAT CAATACCATA CCTAGTGTTC AGTTACCTTG GCTTAGGGAG GGTTTCAGCA
TTAATGGGTA TCCTCCTATC AGACTACTTA ATAGCGCCGT ATTTACCTTG GCCTCTTGGG
TTAGTCACAT CAATGTTCTT CGACCCATCC ATACTTGATT ACGTGTTTAA TATGCTTACC
CTGTTCTTCA TCGGCCCATT CTTCGAGCGT AGGTATGGGA GGGGTATGAT GTGGAGGGTT
TACCTAATTT CAGGATTCTT CTCAGCATTA TCAATATTCA TATATGGACC CAATACATTC
ATTGCAGGGG CTTCAGGGGC GTTATTCGGT ATGATAGGAT TCATAATCGC CCTACCTGAT
AGGTGGGTAA TATTATCTAA TCCATGGAAC GTAATAGCGA TAATATTCCT CCTAACACCA
TTCGCAGCCA GTTTCGGCAT AGCATATCTT GGTCATTTAC TGGGTTTCGT AGTTGGTATA
GTTTACGGCT ATGTTTGGTA TAGGAGGGTT GTTAGGTATG GTGCTAGGCT TAGGTATAGG
TATTTTTAA
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| Protein sequence | MASQPLHVNA RTTAIIIIIN SVLSIPYLVF SYLGLGRVSA LMGILLSDYL IAPYLPWPLG
LVTSMFFDPS ILDYVFNMLT LFFIGPFFER RYGRGMMWRV YLISGFFSAL SIFIYGPNTF
IAGASGALFG MIGFIIALPD RWVILSNPWN VIAIIFLLTP FAASFGIAYL GHLLGFVVGI
VYGYVWYRRV VRYGARLRYR YF
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