| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0814 |
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| Symbol | |
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| ID | 5710080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 853625 |
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| End bp | 854320 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275317 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_001540639 |
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| Protein GI | 159041387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTATTA ATGCACATTA CCATGATTTA CTCAGGAACC TAATTAATTG CAACTACTGC
GAAAGGTTAG TAAGGTATAG GGTAACCGTG CCACCGTTAC CTAGGTTTAG TAATGATGAA
TACTGGAGGA AACCAGTACC ACCTTGGGGA GACTTGAGTA ACCCAAGAAT CATGATAGTG
GGGTTAGCAC CAGCCGCCCA TGGTGGCAAT AGGACGGGTA GAATGTTCAC CGGTGATGCG
AGCGCCCAAT TCCTTTTCAA GGCTCTTCAC GCATGTGGAT TATCAAATAA CCCATATAGC
CTTAGTAGGA TTGACGGCAC TAAGGTTAAC TGTGTTTACA TTACGTCAGT CGTTAAGTGT
GCACCACCGG ATAATAAACC AACTCCAGGT GAGGTTAAGG CTTGTGTAGG CAGGTGGTTT
ATTAATGAAA TAAATATGGT TAAGCCTAGG GCGATAGTGG TGCTTGGTGA AGTTGCATGG
AGGGGAGTGG CCATGGCTCT TGGGCTACGT GGAGGCTTTA AGCATGGGGG TGTAGTTAAG
ATTAACGATA CTGCAGTATA CATGAGTTAT CACCCAAGTC CAAGGAATAC TAATACTGGT
AGGTTAAGAT TAAGTGACCT AGTTAACATA CTATGTGCAG CCGCTAAATA CGCTGGTTGC
CCTACTCCTC AACTTCAAGG AAACCCTCAG GCGTAA
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| Protein sequence | MSINAHYHDL LRNLINCNYC ERLVRYRVTV PPLPRFSNDE YWRKPVPPWG DLSNPRIMIV
GLAPAAHGGN RTGRMFTGDA SAQFLFKALH ACGLSNNPYS LSRIDGTKVN CVYITSVVKC
APPDNKPTPG EVKACVGRWF INEINMVKPR AIVVLGEVAW RGVAMALGLR GGFKHGGVVK
INDTAVYMSY HPSPRNTNTG RLRLSDLVNI LCAAAKYAGC PTPQLQGNPQ A
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