Gene Cmaq_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0810 
Symbol 
ID5708774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp846413 
End bp847654 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content46% 
IMG OID641275313 
Productglycosyl transferase group 1 
Protein accessionYP_001540635 
Protein GI159041383 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.286793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.59117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGTGA CTCATCGTTA CTGGGGATCA CCAGGAGGTG GTCAATTAGT CTGTGCCTCA 
GCTGCCTTCT CGCTTGATAA ACTGGGATTT AACCCAGTGT TAACCGGTAC ATTTAAGTTT
AATCCAAGCA AGTACATTGA CTGGTATGGT ATCGACATAT CCAAGTACCC TGTGGTGACA
CTACCCCTCG GTAATATTAA GGCCTTTGGC CTATGGACAA GGTTATTCGT ATGGTACCCT
GCGGTTAAGG CGATTAATAA GTACCGTGCC CTACTAATGT TCACTGATGA GGAGACCTAT
AAACCATTAA TTAACTATAG GGGGAGGGGA TTAAGCATAA TCGAGTACAT TCACTTCCCC
TTCGAGGTAA TAATTAACCC TAAATTTAAG GGAACTGGGT TAGCTTACGG TGAGGATCCA
TACGTCACTG AGAGGTATGG TAGGTTCCCA ATGAATCTTT ACTGGGGATT ATTCACAAGG
CTGCTTCCGC ACTACATTAG GGAGAACCCG TTCAATGATG CTGACGTGGT TTTAACGAAC
TCCAAGTGGA CCGCTGGAGT GGCTAAGATG GTTTACGGTG AGGAACCCAC TGTACTTAAC
CCACCCATAG CCCCTAATAC TGAGATAGTT GAGGAACCTA AGGCATTTGA TGAAAGGGAT
AATTGGGTCA TTATGCTTGG TAGGTTCAGT GAGGAGAAGA GGTACCACTG GGTTGTCACT
GAGCTTGCCC CAAGGCTCCT TAAAGAGGTT AAGGCCACTA GAATAATCAT ATTTGGTGGA
GCCACCACTA GAACGCAGTT AACGTACATG AGTAGGGTCA TGGATTTGGC GGGTAAGGCT
GGTTTAAGGG TTTCAAGTGA TATTAGTAAG GACGCTGACC TATACCTGGT GCCTAATGCA
CCTAGGAGGT TGATAAATGA ATTAATGGAT TCAGGTAAGG TTTTCCTCCA CGCAACAATA
AATGAACACT GGGGCATAGC GGTGGCTGAG GCTATGGCAA GGGGATTACC TACAGTTGTC
CATAAGTCAG GGGGTACTTG GAGTGACTTA ATTGAGAATG GTGTGAGGGG GCTAGGGTAC
AGTGATGTTG ATGAAGCCAT TAACGCAGTG GCGAAACTAA TCACTGACGG TAAGGCTTGG
AGCCACTACT CATCGGCATC AGTAAGTAAG GCTAAGGATA TGACTCTGCA GGCCTTCATG
AGTAAGTTCA GTGAAATACT CAGGAAGGAG GACTTAATTT AA
 
Protein sequence
MLVTHRYWGS PGGGQLVCAS AAFSLDKLGF NPVLTGTFKF NPSKYIDWYG IDISKYPVVT 
LPLGNIKAFG LWTRLFVWYP AVKAINKYRA LLMFTDEETY KPLINYRGRG LSIIEYIHFP
FEVIINPKFK GTGLAYGEDP YVTERYGRFP MNLYWGLFTR LLPHYIRENP FNDADVVLTN
SKWTAGVAKM VYGEEPTVLN PPIAPNTEIV EEPKAFDERD NWVIMLGRFS EEKRYHWVVT
ELAPRLLKEV KATRIIIFGG ATTRTQLTYM SRVMDLAGKA GLRVSSDISK DADLYLVPNA
PRRLINELMD SGKVFLHATI NEHWGIAVAE AMARGLPTVV HKSGGTWSDL IENGVRGLGY
SDVDEAINAV AKLITDGKAW SHYSSASVSK AKDMTLQAFM SKFSEILRKE DLI