| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0809 |
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| Symbol | |
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| ID | 5708773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 844450 |
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| End bp | 846228 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275312 |
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| Product | transketolase central region |
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| Protein accession | YP_001540634 |
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| Protein GI | 159041382 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit
[COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.32467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.55266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA ATATAGATTG TATAGGCTGT TTAGATTGGT ATGGAATTCG GGACCCACGT
GGAATACCTG GAATGGTAAA AGAGGCTAAG GTGAACCTGG TTAATAGGGT TAAGGAGATA
AGTAATAAGG CCCGTTCAAT ATTGGTTGGG TTAAGCCTAA TAGATCCACA TATTCACTTG
GGCTCATCCC TATCAAGCAT AGATATTATA GCTACACTAT ACTTAATGAC TAATGTACGT
GATAATGATC CATTAAGGAG GGATTACGTA ATATTATCAA AGGGTCACGC AGCCCCAGCA
TTATACGTGG TGTTATCGGA ATTAGGCCTA GTTAATAGGG AGGAGTTAAT GATGATTAAT
GAACCCTGGA GCCCACTGCA GGGTCACCCT GAGGTTAAGT TACCAACAGT ACCAGTATCC
ACAGGTAGTC TAGCGCAGGG GTTAAGTACA GCCGTGGGTA TTGCAAGGGG GTTAATGGCT
AGGGAGGCCT CAGGTAAGGT TTTCGTAATA GTGGGTGATG GTGAATTAGA TGAGGGGCAG
GCCTGGGAGG CGTTAATGGA TATTGCTGAA TCTAAGTTAA GCAACTTATT CATAATAATT
GACTACAATG GTGTTCAATT AGATGGACCA GTGAGGGGTA TTAAATCAAC GTTAACTGAG
GCACTTAAGT CACTGGGATT CACCGTACTG GAGTGTGATG GACATGACCC AGAGGCCTTG
ATTGATACTC TGATTCAAGC ACATAAGGTA AATGGACCCA AGGTTATAGT AGCCAGAACC
ATTAGGGGGA AGGGGGTTTC CGACATTGAG GGAACCAGTA AACAGAGGAT ACTGGATGAT
GGTGGGGAAC CTGGCTTCGG ATCAATGAGG GATGCTGTCG GCAGGGCTCT CCTTGAGGCG
GGTGAAAGGT ACAATGACTT ATACGTGGTT ACAGCTGATG TAGGTGGGTC AACAAGGGCT
ATTTGGTTTA AGGAGAAGTT CCCCAACAGG TACATTGACG TTGGTATAGC TGAACAACAC
ATGATTGGTG TAGCCAGTGG ATTAGCCTTA ACAGGCCTTA GACCTGTGGC CATTGGGTTC
GCAATGTTCA TAATGAGGGC TTGGGAACAG GTTAGGAATA CGGTATCTAG GATGAATCTT
AACGTTAAGA TTATTGGAAC CCACTCCGGC TTAAGCGATT ACGCTGATGG GGCTTCCCAC
CAAACCTTCG AGGACATATC ACTAATGAGG ACTCTACCAA ACATGACCAT TGTAGTACCC
GCCGACCCCA ATGAGGCTGG TAAAGCTGTG TTAGCGTTAA TGGAGCATCA GGGACCAGCC
TACGTCAGGA TTGGTAGGGA TTACGGACCC AGGGTAACTA ATGGTGATGA ATTCAAGCTA
GGTAAGGCCT CAGTGCTTAG GGATGGGGAT GATTTAGCAA TTATTGGTGC TGGACCAGTC
CTATGGGATG CTTTAATGGC TGCTGAGGAA TTAGGTAAAA TGGGGGTATC GGTAATGGTC
ATTAACCTAA GCACGATTAA ACCCATTGAC GTTGACACTG TGGTTAAGGC AGCTAAGAGA
ACTGGGGCGG TATTGACTAT TGAGGAGCAT TCAACACATG GTGGGGTTGG TTCAGCGGTA
GCTGAGGTGC TTTCCCAAAA TTACCCTGTG CCAATTAGGA TGATTGGGAT TAATGGGTTT
GGTAGGTCAG GTAGATCAAC CAGGCAGTTA ATGGAGTACA TTGGTTTAAC ACATAGGAGG
ATTGTTAATG AGGCTCTCAC GCTAATTAAG GGTGAGTAA
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| Protein sequence | MLKNIDCIGC LDWYGIRDPR GIPGMVKEAK VNLVNRVKEI SNKARSILVG LSLIDPHIHL
GSSLSSIDII ATLYLMTNVR DNDPLRRDYV ILSKGHAAPA LYVVLSELGL VNREELMMIN
EPWSPLQGHP EVKLPTVPVS TGSLAQGLST AVGIARGLMA REASGKVFVI VGDGELDEGQ
AWEALMDIAE SKLSNLFIII DYNGVQLDGP VRGIKSTLTE ALKSLGFTVL ECDGHDPEAL
IDTLIQAHKV NGPKVIVART IRGKGVSDIE GTSKQRILDD GGEPGFGSMR DAVGRALLEA
GERYNDLYVV TADVGGSTRA IWFKEKFPNR YIDVGIAEQH MIGVASGLAL TGLRPVAIGF
AMFIMRAWEQ VRNTVSRMNL NVKIIGTHSG LSDYADGASH QTFEDISLMR TLPNMTIVVP
ADPNEAGKAV LALMEHQGPA YVRIGRDYGP RVTNGDEFKL GKASVLRDGD DLAIIGAGPV
LWDALMAAEE LGKMGVSVMV INLSTIKPID VDTVVKAAKR TGAVLTIEEH STHGGVGSAV
AEVLSQNYPV PIRMIGINGF GRSGRSTRQL MEYIGLTHRR IVNEALTLIK GE
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