Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0771 |
Symbol | |
ID | 5708768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 803751 |
End bp | 806378 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275274 |
Product | hypothetical protein |
Protein accession | YP_001540596 |
Protein GI | 159041344 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGT TATCGAAAAC CTCAGTAAGT GAAGTAAAGT TAACTACAAT AATGGTGGCG GTAAGCCTAC TAGCCCTAGT GGGTTTCCTT AAGGTAACCT ACGCTCAAAA CACCCCACCA CCCTTCGTTA TATTAAATGA ACAAGCCACG CCATCACTAA CACCCGTTGG CGTCTCTAAG TTAACGTTAA CCGTAGAGTA CACTGGTGGC TACTACTTAT ATGATGTCTA CTTCCAATTA CAACCAACCC TCTCATGCGG TAATTACACT GTTTCACCAG GCTCAATATT CATTGATTGG ATTAGTCCCC AACAGGAATT AACCTTAACT TACCTTATAA ATGGTTCATT ACCCATTAAT TGTCAGGCAA ACCTTAACGT TAACTGGGGT GGAGAATCCA AGTACTCTCA ATTAACATCA TCATACGTTA ATGCTGGTGG TTCAGGTTCA ACAAGCATAA CATTACCTAT AGTGATATAC GGTGAACCGA ATATTGACAT TAACGTTAAT CAAGGCTACT TAATATATGG TTCAATCAAC CCAATCACAT TAACTGTAAC AAATAATGGA AGCGGACCAA TATACAATAT GGCTATTTCA ATTCAGGCCA ATGGAGCCTA CCTAAGCCCC AGTGGAGTAT CAACTGTAAT TAATTACCTT AATCCCGGTG AATCACTACC ATTAATGATT AACGTAGTAC CCACTTCAAC TGCCTCAGTG ACATTAACCA TAACCTACAG TGGCATAACT CAAAGCGGTG ATTCAGTATC AGGCTCCTCA ACAATAAGTA TGAGTACCTT ATCAGTGTCA GCAAGCCAAG TTACCGTATA TCCACTTAAC TCCACGCTTA GTCCAGGGCC TGGGATTCTT GAGATAGGTG TACGTAATCT AAACCCGGTA ACACTGTATA ATGTGACTAT TCAACTGGTT TCAACACAGG GATTGATACT AAGGGGTAAT AGTACAATAA TGGTATCAAG CATACCCAGT GGCGGTTACT TAACCCTCAC TGTACCGGTG GTTGTACCAT TATCCGCCAC AACCGCCTCA ATAAGTTACG TATTATCATT CCAGTTACCT AACGGTTACG TAAGCAGTGG AGAAGGTTCA CTCACCTTAA GCATCTATGG TGTGGCTAAC CCATTATCAG TACTACTCCT TAACTCAACA ATAAGCCCTG GATTAGGGGA ATTAACGCTT CGTGTACTTA ACTCAGCCTC AGTGACATTA TACAATGTTA GCCTAGTGTT TAACTCCGCA GGTGGGTTAA GTTTAGGTGG CAGTGAGTAT AATATACCTG AACTACCCCC AGGTGGTTCA TACTATATTT CAGTACCCGT AATGACCCCA TCAACAACAG GCACGGCAAC CATTAGCTAC ACACTCTACT ACTACCTAAC ACCAAGCACA TATGGTGGAA GCATAACTGG GTCATTACCA GTCAACGTAA TTAGCCCCCA GTCAATATTA ACTGTTTACC CACTTAACTC AACCATAGGT ATTGGTAATG AGACAATACC CATCGTTATC AGGAATAATT TAGGATCAAG CCTAAGTAAC GTCACCTTCA CAATAACCTC AGCACAGGGG GCGTATCCAC TAGTGACTAG TTTTAACATT GGTGAAATAC AACCGTATAG TGCACGCATG GTTACTGTAC CGTTAATGGT ACCTTTATCA GCGGGCTCAG TGGTGATTAA CTATGTTTTA ACATACGGCG TAGGCAAGTA CGTAAGTAAC GTTAATGGTG AATTAAACCT AGGGGTGTCA AGTGCACCCA GTGTCATAGC CGTGGTTTAT CCACTTAACT CAACCCTCAA TGCTGGTTTA GGTAAGTTAA TACTAGGTAT ACGTAATAAT GAACCAGTAC CACTCTACAA TTTAACGCTA ATCTTCAATT CAGTGAACGG CATGTCTATT ACTAATACTG AGTATCATAT TAATGAAGTT GGGGCCGGGG GAACCTACTA CTTAACGGTA CCTGCAGCCA TACCATCATC ATCAAGCTCA GTCTCACTAA GCTACACCCT AATGTACAGT TACGCTGGTG GTGAGGGTAA TGTTGAGGGC CAAATAACCA TGAGTGTTGC TGGGTTACCG CAAATCCTAA TAACTGGTTA CACCATTGCA CCAACAGTAG CCACGGTGGG TACTGATGTA TCAATATCAT TAACACTAGT TAACTCAGGT CCAGTAACTG CAAATAACCT GAACGTAACA ATGCTAACCA GTCCCGGATT AGAAGCCATT AGTGGTAGGA GTATTTACCT CGGTTCACTT GGATCCCAGT CACTAAGTAA TGTTGCCTTC ACAGTGCTAC CAGTTAGGCC GCTTAACGGT TCAATAATCT TCATAATCAC ATTCACTGAT CAGTATGGGC AGCTTCACAG GATTTACTAC AGTGTGCCGA TTAGGGTGTT TGGGAATTCA ACCAGGTTCG CTGGCTTCCC AGGTAGCAAT AGTAGTGGTA GGTTCTTCAC AAGGGTCTTC ACAACCACGG CTAGTAGAGT AAGTGGTAGT AGGTATGGGT TAGTAACCTA CATCACAATT GCGGTGGTGG TGATTATTGT AGTTGCCGTG GTTGTACTTG CCTTAAGGAG GAGGGGTGGT GGTAGTGAGG GTCATTGA
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Protein sequence | MNPLSKTSVS EVKLTTIMVA VSLLALVGFL KVTYAQNTPP PFVILNEQAT PSLTPVGVSK LTLTVEYTGG YYLYDVYFQL QPTLSCGNYT VSPGSIFIDW ISPQQELTLT YLINGSLPIN CQANLNVNWG GESKYSQLTS SYVNAGGSGS TSITLPIVIY GEPNIDINVN QGYLIYGSIN PITLTVTNNG SGPIYNMAIS IQANGAYLSP SGVSTVINYL NPGESLPLMI NVVPTSTASV TLTITYSGIT QSGDSVSGSS TISMSTLSVS ASQVTVYPLN STLSPGPGIL EIGVRNLNPV TLYNVTIQLV STQGLILRGN STIMVSSIPS GGYLTLTVPV VVPLSATTAS ISYVLSFQLP NGYVSSGEGS LTLSIYGVAN PLSVLLLNST ISPGLGELTL RVLNSASVTL YNVSLVFNSA GGLSLGGSEY NIPELPPGGS YYISVPVMTP STTGTATISY TLYYYLTPST YGGSITGSLP VNVISPQSIL TVYPLNSTIG IGNETIPIVI RNNLGSSLSN VTFTITSAQG AYPLVTSFNI GEIQPYSARM VTVPLMVPLS AGSVVINYVL TYGVGKYVSN VNGELNLGVS SAPSVIAVVY PLNSTLNAGL GKLILGIRNN EPVPLYNLTL IFNSVNGMSI TNTEYHINEV GAGGTYYLTV PAAIPSSSSS VSLSYTLMYS YAGGEGNVEG QITMSVAGLP QILITGYTIA PTVATVGTDV SISLTLVNSG PVTANNLNVT MLTSPGLEAI SGRSIYLGSL GSQSLSNVAF TVLPVRPLNG SIIFIITFTD QYGQLHRIYY SVPIRVFGNS TRFAGFPGSN SSGRFFTRVF TTTASRVSGS RYGLVTYITI AVVVIIVVAV VVLALRRRGG GSEGH
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