| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0751 |
|---|
| Symbol | |
|---|
| ID | 5708859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 782480 |
|---|
| End bp | 783412 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275253 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540577 |
|---|
| Protein GI | 159041325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2248] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTT TAATCAGACC CCTTGGTGAG GAGAGTCTTG GCATTAGGTC GATGAGTCTT
TACGTGGAGA CTAGGGGCTT AAGGATATTG ATTGACCCAG GGGCAAGCCT AGCCCCCTTT
AGGTTTGGTT TACCACCGCA TCCAAGGGAG TTTGATGCCC TTAAGGCATT TAGGGAGAGG
TTAATGGACT TGGTGGATAA GGTTGATTAC ATATTCATAT CCCATTACCA TAGGGATCAC
TTCACCCCAC CCTACAGTAG TGTTTACATG GGTACCGGTG CCAAGGATTA TGAATTAATT
TATGGAGGTA AGGTGGTGTT GGCTAAGGAT TATGAAACCG TTAACCCAAG TCAAAGAAGG
AGGGGCATTG GACTCTTCAA GGCTGTTCAA GGCTTAGTGA GTAAGTGGGT TAAGTGCGAT
GGGCAGGTTA TTGATATTAA TGGTACTAGG CTCATAATCT CTAACCCAAT ACCCCATGGT
AAACCAGGCA GTAAAACCGG GTACGTGGTG GGCTTAGGTA TTATTGATGA GTCCGGTTCC
CTCGCCTACA TACCTGATGT TCAAGGCCCC CTCTCCAGGG AGGCCGTTGA GTTTGCGTTA
AGCCTTAAGG CTGAAATCCT GGTAATAGGT GGTTTTCCAG TATACCTTCT TGGAAACTCC
TTTAAGCAGG AGGATCTTAA TGAGGCTAAT AATAACTTAA TCACAATATG GAACATGGCT
AAGCCTAAGA AGCTAATACT TGCCCATCAC TTACTTAGAA TAATTAACTG GAGGAATTAC
ATACCAAGTA TTATTGAAGC GCATACCTAC GCATCCATCC TTGGGTTAAA CGATAACCTG
CTTGAAGCCA GGAGGAGGGA ATTATATGAA ATTGAGGATC CAGGTAGAGG TTACGTTAAT
AAATTTAAAA GAAGGAGTAA TAGGGAGGAG TAG
|
|---|
| Protein sequence | MVILIRPLGE ESLGIRSMSL YVETRGLRIL IDPGASLAPF RFGLPPHPRE FDALKAFRER
LMDLVDKVDY IFISHYHRDH FTPPYSSVYM GTGAKDYELI YGGKVVLAKD YETVNPSQRR
RGIGLFKAVQ GLVSKWVKCD GQVIDINGTR LIISNPIPHG KPGSKTGYVV GLGIIDESGS
LAYIPDVQGP LSREAVEFAL SLKAEILVIG GFPVYLLGNS FKQEDLNEAN NNLITIWNMA
KPKKLILAHH LLRIINWRNY IPSIIEAHTY ASILGLNDNL LEARRRELYE IEDPGRGYVN
KFKRRSNREE
|
|---|
| |