| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0604 |
|---|
| Symbol | |
|---|
| ID | 5710242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 636663 |
|---|
| End bp | 637361 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641275105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540435 |
|---|
| Protein GI | 159041183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA ATATCGATAT CGGTAATGTC ATCATGAAGA TAGTAACCGC ACCGGGTCCT
GTTTCATACC CTTTAATACT TGCCTCAAGG GATTATGGTG ACTTAGATCT TGTATTCGCT
AAGGGTAAGG AGACTGAGAA CGCCTATGCA GTGGCTGATT CACTAGTGTC CTTGATTAAG
AATGATTTAA GAATAGACAT GGTAACAGTT AAGAGACTAA TGTTCATTTA TCCTAAACTA
CAGGGACCTA GGATTGCCAT CTGGAGACGC GGTAGTGCAG CGGATTTACT TACTAGAGCA
TTATTGGATA AGGTTGGGTT AAAGGCTGAG CTCGTCTATG CTGATGACTG GTACTCTATA
TTTAACATGC TTAATAGAGG TGAGGTTCAA AGTGCTGTAC TTAACTTAGG AGTACTTGAG
CATAATGATG CATTTTTAGA GGAATTAATT AATGCACCTG GAGCCTGTGG TGCCTACGTG
AATGGTAATC CGCAATACTT CATAGATGCT TATACAGCCG GCATTGAGGC TATTAGAAAA
GACCTAACTA ATGCCGCCGA TTACATAGTG AGGAAGTTAC CGATCACCAT CCCTAAGGAG
TTCATTGAGA ATATTCTCAG GAGGGTTAAA TACGGCATAT ATGATCCTGG CGACTACGTT
AGTTTTATTA ATGTTGTTAA AAGGTATAGT GAGGCTTAA
|
|---|
| Protein sequence | MFKNIDIGNV IMKIVTAPGP VSYPLILASR DYGDLDLVFA KGKETENAYA VADSLVSLIK
NDLRIDMVTV KRLMFIYPKL QGPRIAIWRR GSAADLLTRA LLDKVGLKAE LVYADDWYSI
FNMLNRGEVQ SAVLNLGVLE HNDAFLEELI NAPGACGAYV NGNPQYFIDA YTAGIEAIRK
DLTNAADYIV RKLPITIPKE FIENILRRVK YGIYDPGDYV SFINVVKRYS EA
|
|---|
| |