Gene Cmaq_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0418 
Symbol 
ID5708796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp451432 
End bp451941 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content42% 
IMG OID641274921 
Producthypothetical protein 
Protein accessionYP_001540253 
Protein GI159041001 
COG category 
COG ID 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATT CAAGTAAAAG AATGAGGAGG GGTATTGAAC CCATAGTGGC CGCAATACTA 
TTAATAGTGA TAACTGTGGT GGCTGCAGTA CTACTTTACT TCTGGTTCTC AGGATACTTA
TCGGCAACCA CGACAAGAGT ATCACAAATA TCGGCACCGG AGGAGGCTCA AATAATTGGA
GTTAACTACG CCCCCACTAG CAATTATTTA GTCGTATTCC TTCAGAATGT TGGGCAAATA
CCTATAACCA TAGCGCAGGC ATATATATTA AATAGTACAA CACTCAATGT AGTATGTTCA
CTAGCAATAA GTGGGTATAC GCCATTACCT AGTTCAGTCT CCAGTACATC GGGCCCAGTA
TCATCAGTAT CCACTGTAAC CATAGGAGGC AGTGGTGCGG TAGCTATATT TCTTGGTTTA
TCAGGCTGTA GCCTAAGTCC AAACACCATA TATGTGGTTA AGCTTGTTAC TGCTAGGGGT
ACTCAGATAA CTTACGAGTT CTCAACGTAA
 
Protein sequence
MDYSSKRMRR GIEPIVAAIL LIVITVVAAV LLYFWFSGYL SATTTRVSQI SAPEEAQIIG 
VNYAPTSNYL VVFLQNVGQI PITIAQAYIL NSTTLNVVCS LAISGYTPLP SSVSSTSGPV
SSVSTVTIGG SGAVAIFLGL SGCSLSPNTI YVVKLVTARG TQITYEFST