Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0400 |
Symbol | |
ID | 5709436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 436075 |
End bp | 436887 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274904 |
Product | stationary-phase survival protein SurE |
Protein accession | YP_001540236 |
Protein GI | 159040984 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.207609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGATAC TGGTAACCAA TGATGATGGA TTAACCTCAA TGGGCATAGT AACCCTAGCC AATGAATTAG CCAAGGAACA TGAGGTACAC GTAGTAGCAC CTGAAACTCA ACTAAGCAGC ATAGGTGCCG CCAGGACGTA TAATAGGCCA ATAAGGATAT GGAGGTGGAA CGGTGGCCTT TACAATGGTC CAGTGGACGT CTATGCAACA GACGGCACAC CCTCTGACGC AGTCTTCATG GGTATTAATA TGTTTAAACC GGAAATAGTG GTTAGCGGTG TTAACCTAGG TGAAAACGTG GGCCTTGAGT CACTGTTCAT AAGTGGTACA ATAGGGGCGG TGATTCAATC ATCATTAATA GGTGTCCCAG GCATAGCAGC CTCAATAGAG GTACCGCCTC ATAGTAAATT CATAATACCA CAGATCAATG GAGATTACTT CAGCGGCATT GTTAAGGTGA TTAAGGGTAT TATTAATCAC ATTGAGGCTG AGGGATGGGT TAAGGGAGTT GATGCACTCT CACTCAATAT GCCATCACCA AGTAGGTGGA GTGGGGGATA CGTGGTGGTT TCACGTATGG CTAAGCGACT GTTTAAGGAG ACTGTGATTG AGTCAAGTGA CCCAAGGGGT AATAAGATAT ACTGGAGATG GGGTGAGGAG TTAATGCCGT TAGACACTGA TACTGACGCC TACGCATTCT ACAGGGAGGG AAAACTGACT GTGACACCGT TAATCCTAGG TGATTCAAGT ACTGGGCTTA GTGATATTGT TAGGAGTATT GAGGAATTAA TCAGTAAGGT TATTAGGGCT TAA
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Protein sequence | MRILVTNDDG LTSMGIVTLA NELAKEHEVH VVAPETQLSS IGAARTYNRP IRIWRWNGGL YNGPVDVYAT DGTPSDAVFM GINMFKPEIV VSGVNLGENV GLESLFISGT IGAVIQSSLI GVPGIAASIE VPPHSKFIIP QINGDYFSGI VKVIKGIINH IEAEGWVKGV DALSLNMPSP SRWSGGYVVV SRMAKRLFKE TVIESSDPRG NKIYWRWGEE LMPLDTDTDA YAFYREGKLT VTPLILGDSS TGLSDIVRSI EELISKVIRA
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