Gene Cmaq_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0400 
Symbol 
ID5709436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp436075 
End bp436887 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID641274904 
Productstationary-phase survival protein SurE 
Protein accessionYP_001540236 
Protein GI159040984 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.207609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGATAC TGGTAACCAA TGATGATGGA TTAACCTCAA TGGGCATAGT AACCCTAGCC 
AATGAATTAG CCAAGGAACA TGAGGTACAC GTAGTAGCAC CTGAAACTCA ACTAAGCAGC
ATAGGTGCCG CCAGGACGTA TAATAGGCCA ATAAGGATAT GGAGGTGGAA CGGTGGCCTT
TACAATGGTC CAGTGGACGT CTATGCAACA GACGGCACAC CCTCTGACGC AGTCTTCATG
GGTATTAATA TGTTTAAACC GGAAATAGTG GTTAGCGGTG TTAACCTAGG TGAAAACGTG
GGCCTTGAGT CACTGTTCAT AAGTGGTACA ATAGGGGCGG TGATTCAATC ATCATTAATA
GGTGTCCCAG GCATAGCAGC CTCAATAGAG GTACCGCCTC ATAGTAAATT CATAATACCA
CAGATCAATG GAGATTACTT CAGCGGCATT GTTAAGGTGA TTAAGGGTAT TATTAATCAC
ATTGAGGCTG AGGGATGGGT TAAGGGAGTT GATGCACTCT CACTCAATAT GCCATCACCA
AGTAGGTGGA GTGGGGGATA CGTGGTGGTT TCACGTATGG CTAAGCGACT GTTTAAGGAG
ACTGTGATTG AGTCAAGTGA CCCAAGGGGT AATAAGATAT ACTGGAGATG GGGTGAGGAG
TTAATGCCGT TAGACACTGA TACTGACGCC TACGCATTCT ACAGGGAGGG AAAACTGACT
GTGACACCGT TAATCCTAGG TGATTCAAGT ACTGGGCTTA GTGATATTGT TAGGAGTATT
GAGGAATTAA TCAGTAAGGT TATTAGGGCT TAA
 
Protein sequence
MRILVTNDDG LTSMGIVTLA NELAKEHEVH VVAPETQLSS IGAARTYNRP IRIWRWNGGL 
YNGPVDVYAT DGTPSDAVFM GINMFKPEIV VSGVNLGENV GLESLFISGT IGAVIQSSLI
GVPGIAASIE VPPHSKFIIP QINGDYFSGI VKVIKGIINH IEAEGWVKGV DALSLNMPSP
SRWSGGYVVV SRMAKRLFKE TVIESSDPRG NKIYWRWGEE LMPLDTDTDA YAFYREGKLT
VTPLILGDSS TGLSDIVRSI EELISKVIRA