Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0324 |
Symbol | |
ID | 5709231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 363176 |
End bp | 363517 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641274828 |
Product | hypothetical protein |
Protein accession | YP_001540162 |
Protein GI | 159040910 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5550] Predicted aspartyl protease |
TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0389655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACGT TGATGCGACA ATATACGGGG AGGGAACCAA GAACCGTAAA AGCCCTTGTG GATACGGGCG CCACGTACAC GGTCATACCC AGGAAACTGG CTGAGGAACT CGGTATAAGG GGTTTGGGAA CCTTCATTAA TGTACTCGCG GCAAAGGGGT ATGTAAGGCT TGAGGAGGCC TTGGTCACCA TGGAAATAAT GAATGAAAGG AGGAATCAAG TGGTGCTGTT ATCGGACAAT GCTGACATGG TAATTGTGGG GGTCATAACA CTGGAATCCA TGGGGTTTAT CGCGGATCCA ACCACAGGTA AGCTCGAGAG ATCAGGGGTC TTCCTACTCT AG
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Protein sequence | MYTLMRQYTG REPRTVKALV DTGATYTVIP RKLAEELGIR GLGTFINVLA AKGYVRLEEA LVTMEIMNER RNQVVLLSDN ADMVIVGVIT LESMGFIADP TTGKLERSGV FLL
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