Gene Cmaq_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0324 
Symbol 
ID5709231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp363176 
End bp363517 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content49% 
IMG OID641274828 
Producthypothetical protein 
Protein accessionYP_001540162 
Protein GI159040910 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5550] Predicted aspartyl protease 
TIGRFAM ID[TIGR02281] clan AA aspartic protease, TIGR02281 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0389655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACGT TGATGCGACA ATATACGGGG AGGGAACCAA GAACCGTAAA AGCCCTTGTG 
GATACGGGCG CCACGTACAC GGTCATACCC AGGAAACTGG CTGAGGAACT CGGTATAAGG
GGTTTGGGAA CCTTCATTAA TGTACTCGCG GCAAAGGGGT ATGTAAGGCT TGAGGAGGCC
TTGGTCACCA TGGAAATAAT GAATGAAAGG AGGAATCAAG TGGTGCTGTT ATCGGACAAT
GCTGACATGG TAATTGTGGG GGTCATAACA CTGGAATCCA TGGGGTTTAT CGCGGATCCA
ACCACAGGTA AGCTCGAGAG ATCAGGGGTC TTCCTACTCT AG
 
Protein sequence
MYTLMRQYTG REPRTVKALV DTGATYTVIP RKLAEELGIR GLGTFINVLA AKGYVRLEEA 
LVTMEIMNER RNQVVLLSDN ADMVIVGVIT LESMGFIADP TTGKLERSGV FLL