Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0292 |
Symbol | |
ID | 5709849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 330587 |
End bp | 331420 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641274796 |
Product | hypothetical protein |
Protein accession | YP_001540130 |
Protein GI | 159040878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.379037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0369953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATAA TTAATGCCGC CCCAGCATTA TCAACAGCCT TCATTTGGGC GTGGGCATCA GTGACGTATA AGGATTTCAT GAGTAGGTTA AACCCATTAA CCGTTAACTT CCTTAGGATG CTTTACACCA CCATTGCCTT AGCTATTCCA GCGGCCTTAA TTGGCTTTAA CGCTGGGGCT ATGTGGGGTT CATTAAGTGG TCTATTATCC TTAGCCTTAG GTGACTCCAT GTACTTAATG GCCATTAACT ACACTGGAGT CTCAGTGGCT GCCCCAATAT CATACTCCTA CATACCCCTC TCAGTACTTA TGGCTACCCT ACTGGGTGAA CCATTAACAA TACTTAAGGT TACCTCAGGA TTACTGATAA TGCTCGGTGT ATACATGTTA TCCAGGGAGA GGACTAAGGT AACGCTTAGG GGTGTGACCT TAGCCCTCGG TACCGCGGTT GCTTGGGCTC TTGGTCAAAC CATGATAAAG GTGGCTGACG TTAATGGCTT AAACCCAGTA TCCATAGCCT TCATTAGGGT TGCCACTGCG GGATTAGTTC TACTGCTGGT TAACCACATG ATGCATAATA ATTTAGCCAC CGCCATAAAG GCAACTATAC GCACCCGCCT ACCCCTAGTG GCTGTACTGG ACCTGGGTAT TGGGGTTGCC TTATTCGCAT ACTCAGTTAA CCTAATAGGA CTTGGCTTAA CAGTAATAGT AACGGGCTGC ATGCCGTTGA TAGCTCAGGT AATGGCTAAG TTCATGGTTG GGGAAAGAAT AACCGTGACT AAGATCACTG GGGCAGTGGT AATAGTACTG GCAATAACCA CAGCCTTCCT ATAG
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Protein sequence | MLIINAAPAL STAFIWAWAS VTYKDFMSRL NPLTVNFLRM LYTTIALAIP AALIGFNAGA MWGSLSGLLS LALGDSMYLM AINYTGVSVA APISYSYIPL SVLMATLLGE PLTILKVTSG LLIMLGVYML SRERTKVTLR GVTLALGTAV AWALGQTMIK VADVNGLNPV SIAFIRVATA GLVLLLVNHM MHNNLATAIK ATIRTRLPLV AVLDLGIGVA LFAYSVNLIG LGLTVIVTGC MPLIAQVMAK FMVGERITVT KITGAVVIVL AITTAFL
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