| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0227 |
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| Symbol | |
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| ID | 5709838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 261490 |
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| End bp | 262179 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641274729 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001540065 |
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| Protein GI | 159040813 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAATA GCTTTTCATA CCTTAGCTTT GATTATGTGC ACTCCACTGA CTGGACTATG
GGCACTGCGG ATGATAATTA CGTATTCCAC GTGCTTAATT CTTATGTTGA TGCCTTGAGG
GATTATGTGT TTGAGTTTGC GCTACTTAAG GTTTGGGGTA GGCGTGATCT TAAGCATTTA
CTGGGGGTGT TTAGTAGGCA TAGGAATGTT AAGGGTGTTG TCTCCCTTAG GCCTCTTAAT
GATGGTTACC CTAAGAGTAT TCAAATAACC CTCAAGGGTG ATTCATCAGA CAGCACCAGA
TACATAGCCC ACATGCTGGG GGGAATAGAG GTTAAGGCAA TTTATGAAAA CGGTATAGAA
CACTGGGGAT TCCTATTCCC TAACGATGAG TCAGCTAAAT CATTTCTAAA CATGGTGAAT
AAGAAGGGTA TTGTTAAGAG GTATAATTTG AATGAAGCGG ATATGGATAA TATAATGGCT
AATGCCTTAA GGAAAGCAGA ATTATTATTA ACGCCCAGTG AATATAAGAT AACTAAGATA
GCCTACAGTA AGGGTTACTT TGAAGTACCC AGGTTGATTA AATTGGATGA GTTGGCTAGG
GAGTTAGGCC TATCCAAGGC CACTATTGAT GAATACATTA GGAGCGCAAT ACGTAAAATA
CTTGAGCATG TATTCACTGA TGAAGCCTAG
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| Protein sequence | MRNSFSYLSF DYVHSTDWTM GTADDNYVFH VLNSYVDALR DYVFEFALLK VWGRRDLKHL
LGVFSRHRNV KGVVSLRPLN DGYPKSIQIT LKGDSSDSTR YIAHMLGGIE VKAIYENGIE
HWGFLFPNDE SAKSFLNMVN KKGIVKRYNL NEADMDNIMA NALRKAELLL TPSEYKITKI
AYSKGYFEVP RLIKLDELAR ELGLSKATID EYIRSAIRKI LEHVFTDEA
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