Gene Cmaq_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0223 
Symbol 
ID5709974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp258141 
End bp259478 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content44% 
IMG OID641274726 
Productmajor facilitator transporter 
Protein accessionYP_001540062 
Protein GI159040810 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTA GTATGCGGGT GACTGAAGTC CCAAGGATTG TTAAATCCAC GGTGTTGGCT 
GCTGGGTTGG GTACAATGCT TGATTACTAT GATTTTCTAC TGGCTGCTAA TGCAGCTGGC
ACAGTGTGGT TAAGCCTGTA TTTTGAGCCT GCCTTTAAGG TACCGGGTAT AGCCTTATCT
CTGGCAATGG TCACCTACGC TATTGCCTAT GTTATAAGGC CTCTTGGGGC ATTCATATTT
GGGCACATTG GTGATAGGGT GGGTAGGCGG TTTACCCTGG TTTTAACATT AGTATTAGCT
TTCGCATCAA TGGTTATGAT GGGGTTGACT CCGACTTATA GTCAAATTGG CGTATACTCA
ATAATAATCC TACTGGTGTC TAGGCTAATA CTTGGTGTAG GCTTTGGTGG TGAATGGGGT
GGTGGCGCCA CTTGGATTAG TGAAGTAATG CTGGCTAATG GGTACGGTGA CTTAGAGGGA
TTCTGGGGTG GTGTGTTTCA GGTGTTTGCA ACGGCGGGTA TTGCTCTTGC ATCATTAGCC
TTCTCACTCG CATCACTACT AACGCCTCAT CAATTCTTCT ACTCATGGGG GTGGAGAATA
CTATTCCTAA TTGGTGCCGC GGTAATATTA GTGGCTGCGG TGATTAGGCA TAGGTTAATT
GAATCACCAC TCTTCATGGA TTTAATCAAG AGGGGCGGGG TATTGAGGTA CCCTGCCCTT
GAAGTCTTTA GGAGGGAGTG GGTTAAGGTA CTATTACTTG CCTTCGCCTG GTTCTACATA
ACAGCGGTAA CCGTGGTCGC GGTGTTACCC TACTCAGTGA CGTATGTAAC TAGGGTATTA
GGGTTAAGGA CATTAATGGG TATGCAGGCT AACTCATTCA TACTACTATC CTACGCAGTA
TCCTTACTAA CAGGTGGTGT TGCATCAACA CTCATCAGTG GCTTGTTATC GGATAAGCAT
AATCCATTAA TAATCTTAGT AATCGGCTCA GCGGCAACGG GAATAATGAG CATATTATTC
TACCCATTAT TGGCTACAGG TAACCCAGTA ATAATGCTTA CCGCCTTTGA GGCATACATG
GTCTCTGAGT ACATGGGCTT TGGTTCACTA CCGAAATTAT TCACACTATT ATTTCCAACA
ATGTATAGGT ATTCTGGTTC AGGGTTAGCT TACCAATTAG GTGGCTTACT CACTGGATTA
GCATCAGGGT TAATTCTACC TATAATCATA AGTACCTTAG GTTACTCAGC CTGGTATGCG
GTATCAGCAT TAATGGTTTC AATATCCCTA GTCTCATTAG CCTCATCACT AGTACTACTC
AGGGTGACCT CTAAATGA
 
Protein sequence
MIISMRVTEV PRIVKSTVLA AGLGTMLDYY DFLLAANAAG TVWLSLYFEP AFKVPGIALS 
LAMVTYAIAY VIRPLGAFIF GHIGDRVGRR FTLVLTLVLA FASMVMMGLT PTYSQIGVYS
IIILLVSRLI LGVGFGGEWG GGATWISEVM LANGYGDLEG FWGGVFQVFA TAGIALASLA
FSLASLLTPH QFFYSWGWRI LFLIGAAVIL VAAVIRHRLI ESPLFMDLIK RGGVLRYPAL
EVFRREWVKV LLLAFAWFYI TAVTVVAVLP YSVTYVTRVL GLRTLMGMQA NSFILLSYAV
SLLTGGVAST LISGLLSDKH NPLIILVIGS AATGIMSILF YPLLATGNPV IMLTAFEAYM
VSEYMGFGSL PKLFTLLFPT MYRYSGSGLA YQLGGLLTGL ASGLILPIII STLGYSAWYA
VSALMVSISL VSLASSLVLL RVTSK