Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0223 |
Symbol | |
ID | 5709974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 258141 |
End bp | 259478 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274726 |
Product | major facilitator transporter |
Protein accession | YP_001540062 |
Protein GI | 159040810 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCATTA GTATGCGGGT GACTGAAGTC CCAAGGATTG TTAAATCCAC GGTGTTGGCT GCTGGGTTGG GTACAATGCT TGATTACTAT GATTTTCTAC TGGCTGCTAA TGCAGCTGGC ACAGTGTGGT TAAGCCTGTA TTTTGAGCCT GCCTTTAAGG TACCGGGTAT AGCCTTATCT CTGGCAATGG TCACCTACGC TATTGCCTAT GTTATAAGGC CTCTTGGGGC ATTCATATTT GGGCACATTG GTGATAGGGT GGGTAGGCGG TTTACCCTGG TTTTAACATT AGTATTAGCT TTCGCATCAA TGGTTATGAT GGGGTTGACT CCGACTTATA GTCAAATTGG CGTATACTCA ATAATAATCC TACTGGTGTC TAGGCTAATA CTTGGTGTAG GCTTTGGTGG TGAATGGGGT GGTGGCGCCA CTTGGATTAG TGAAGTAATG CTGGCTAATG GGTACGGTGA CTTAGAGGGA TTCTGGGGTG GTGTGTTTCA GGTGTTTGCA ACGGCGGGTA TTGCTCTTGC ATCATTAGCC TTCTCACTCG CATCACTACT AACGCCTCAT CAATTCTTCT ACTCATGGGG GTGGAGAATA CTATTCCTAA TTGGTGCCGC GGTAATATTA GTGGCTGCGG TGATTAGGCA TAGGTTAATT GAATCACCAC TCTTCATGGA TTTAATCAAG AGGGGCGGGG TATTGAGGTA CCCTGCCCTT GAAGTCTTTA GGAGGGAGTG GGTTAAGGTA CTATTACTTG CCTTCGCCTG GTTCTACATA ACAGCGGTAA CCGTGGTCGC GGTGTTACCC TACTCAGTGA CGTATGTAAC TAGGGTATTA GGGTTAAGGA CATTAATGGG TATGCAGGCT AACTCATTCA TACTACTATC CTACGCAGTA TCCTTACTAA CAGGTGGTGT TGCATCAACA CTCATCAGTG GCTTGTTATC GGATAAGCAT AATCCATTAA TAATCTTAGT AATCGGCTCA GCGGCAACGG GAATAATGAG CATATTATTC TACCCATTAT TGGCTACAGG TAACCCAGTA ATAATGCTTA CCGCCTTTGA GGCATACATG GTCTCTGAGT ACATGGGCTT TGGTTCACTA CCGAAATTAT TCACACTATT ATTTCCAACA ATGTATAGGT ATTCTGGTTC AGGGTTAGCT TACCAATTAG GTGGCTTACT CACTGGATTA GCATCAGGGT TAATTCTACC TATAATCATA AGTACCTTAG GTTACTCAGC CTGGTATGCG GTATCAGCAT TAATGGTTTC AATATCCCTA GTCTCATTAG CCTCATCACT AGTACTACTC AGGGTGACCT CTAAATGA
|
Protein sequence | MIISMRVTEV PRIVKSTVLA AGLGTMLDYY DFLLAANAAG TVWLSLYFEP AFKVPGIALS LAMVTYAIAY VIRPLGAFIF GHIGDRVGRR FTLVLTLVLA FASMVMMGLT PTYSQIGVYS IIILLVSRLI LGVGFGGEWG GGATWISEVM LANGYGDLEG FWGGVFQVFA TAGIALASLA FSLASLLTPH QFFYSWGWRI LFLIGAAVIL VAAVIRHRLI ESPLFMDLIK RGGVLRYPAL EVFRREWVKV LLLAFAWFYI TAVTVVAVLP YSVTYVTRVL GLRTLMGMQA NSFILLSYAV SLLTGGVAST LISGLLSDKH NPLIILVIGS AATGIMSILF YPLLATGNPV IMLTAFEAYM VSEYMGFGSL PKLFTLLFPT MYRYSGSGLA YQLGGLLTGL ASGLILPIII STLGYSAWYA VSALMVSISL VSLASSLVLL RVTSK
|
| |