Gene Cmaq_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0212 
Symbol 
ID5709048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp249539 
End bp249775 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content38% 
IMG OID641274715 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001540051 
Protein GI159040799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTG AGGTTTTCCT CCTAATACAG ACCAGGGTTG GGAAGGTATT TGAGGTGTCA 
GAGAAGATAA AATCAATTAA TTGGATTAAG GTGGCTTACT CTGTTACTGG GCCATATGAT
ATAATAGCCT TAGCGGAGGT TGATAGGGTT GATGACTTAG AGAGCTTAAT AAAAATGATT
CATTCAATTG ATGGTGTTGA AAGAACGTTA ACAGCAATGG TGATTAGAAA GCATTAA
 
Protein sequence
MAFEVFLLIQ TRVGKVFEVS EKIKSINWIK VAYSVTGPYD IIALAEVDRV DDLESLIKMI 
HSIDGVERTL TAMVIRKH