Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0163 |
Symbol | |
ID | 5709401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 191563 |
End bp | 193029 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641274666 |
Product | hypothetical protein |
Protein accession | YP_001540002 |
Protein GI | 159040750 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.225935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.257145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACCT CAGCTATCTT AATGCTAATG CTCCTTATAC TACCTCTCAT GTTTATTATT CGTGATGAAT CAATTAGGAT GCTTCAAACT GCTGCGGAAT CGTATCCAAT TTACGTGTCA CTATTTCTTT CGATAATGCT TACTGTTAAT GCATTATCAA GGAGGTTTAT AAGTAGGATT GTTATTCATG ATCCTGGTTC ACAGCCATTA TCAGCATTAT TAACTAGAAC TGAGATTGAC TTCATATTAT CCAGTCCCTT TAACATTAAT GCATTAATAG CCATTAAGTT AACTATTGAT TATATCATAC CCTATGCACT TATTATTACA TTTGGCTCAT TGCTCTCCCT ATTATTAACG CTAATGAGTA TTCATAATGC ATTAATGTTA ATTACGTACG TTATCATATA TGTAGTTAAC GTAGTATTGT TATCCACCTT ACTAGGTTTA TTTAATTTAA TAATACCAAG AACTAATAAT CACTACATTG ATGTGACAAT ACCCGCTGTT ACTTCAGCAT ACTTACTTGC CTCATCATTA ATTAACCCAA GCCTAAACCC ATTACTCAAC ATGAGCAATA TTACCCTAAC CCCCATACTG CTGGCTGCAA TTGCACTCAC ATCAATACCC ATCCTAAGTT TAACCAAGTT AATGTACATT GATGCATACG GTCTTTTAAC GCAACCTAAG AGTAAGTTAA GTAAAGCCAG TGATTCATTT CCCCTTAATT CCTCAATATT CAGGATTATA CTTAATACTT CAGTTAAGCA AGGCTTCAAG ATAGCATTAT CAGCATCAAT AGTAACGTTC GTAACCTTAA CTATCATTAC ATTAACCTTA ACCACCCGCA TAATGAGAGG CCTTGAATTC CTAGTTTACC TACTTGGCTT CCTTATAGCA TACATACATA CATCAATACT CGGTGGCACG TTGGCTCAGG AGAGGCCTTG GATTAACTTC ATGGCTATGG ATGGGTTAAC TTACGTTAGG CTTAGGATGC TTTCAAGGCT AATAGTAACC TACGCATTAT TAACACCCAT TATAGCTTAC TTACTGGTAT TATTCCTGGT TACTGAATCA CCATTAGTAC TTCTTGAAGC ATTCTCAATA ATCTCCATGC CGCCGTTAAC CGTACCCACT TCATGGATAA TAATGGCTGA GGCTAAACTA CCTCAATCAA GGGGTTTAAT TGAGGATAGT CTACACAGGA GTAGCGTTAA GGTTCTGATT CTACTTGGTC TAATGTATGG TTTAGCTGGG TTATTCCTAC TACCACTGGC TATGGAGAAC ATAATGATTA CCACAGGTTT AATACCGGTT AATGAGGTTT CTAGATTCAC CTTAAGCATT GGTTTAATTG AATTAGCGGC ATCAGTCCTA TACTATCTAC TCATCATGTA TAGTGGCTTC TCAGGGCGTG TTTGGCGTTG GTTTATTAGT AAGCTTGCTG AGAATGGTTA CGTTTAG
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Protein sequence | MYTSAILMLM LLILPLMFII RDESIRMLQT AAESYPIYVS LFLSIMLTVN ALSRRFISRI VIHDPGSQPL SALLTRTEID FILSSPFNIN ALIAIKLTID YIIPYALIIT FGSLLSLLLT LMSIHNALML ITYVIIYVVN VVLLSTLLGL FNLIIPRTNN HYIDVTIPAV TSAYLLASSL INPSLNPLLN MSNITLTPIL LAAIALTSIP ILSLTKLMYI DAYGLLTQPK SKLSKASDSF PLNSSIFRII LNTSVKQGFK IALSASIVTF VTLTIITLTL TTRIMRGLEF LVYLLGFLIA YIHTSILGGT LAQERPWINF MAMDGLTYVR LRMLSRLIVT YALLTPIIAY LLVLFLVTES PLVLLEAFSI ISMPPLTVPT SWIIMAEAKL PQSRGLIEDS LHRSSVKVLI LLGLMYGLAG LFLLPLAMEN IMITTGLIPV NEVSRFTLSI GLIELAASVL YYLLIMYSGF SGRVWRWFIS KLAENGYV
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