Gene Cmaq_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0163 
Symbol 
ID5709401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp191563 
End bp193029 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content37% 
IMG OID641274666 
Producthypothetical protein 
Protein accessionYP_001540002 
Protein GI159040750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.225935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.257145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACCT CAGCTATCTT AATGCTAATG CTCCTTATAC TACCTCTCAT GTTTATTATT 
CGTGATGAAT CAATTAGGAT GCTTCAAACT GCTGCGGAAT CGTATCCAAT TTACGTGTCA
CTATTTCTTT CGATAATGCT TACTGTTAAT GCATTATCAA GGAGGTTTAT AAGTAGGATT
GTTATTCATG ATCCTGGTTC ACAGCCATTA TCAGCATTAT TAACTAGAAC TGAGATTGAC
TTCATATTAT CCAGTCCCTT TAACATTAAT GCATTAATAG CCATTAAGTT AACTATTGAT
TATATCATAC CCTATGCACT TATTATTACA TTTGGCTCAT TGCTCTCCCT ATTATTAACG
CTAATGAGTA TTCATAATGC ATTAATGTTA ATTACGTACG TTATCATATA TGTAGTTAAC
GTAGTATTGT TATCCACCTT ACTAGGTTTA TTTAATTTAA TAATACCAAG AACTAATAAT
CACTACATTG ATGTGACAAT ACCCGCTGTT ACTTCAGCAT ACTTACTTGC CTCATCATTA
ATTAACCCAA GCCTAAACCC ATTACTCAAC ATGAGCAATA TTACCCTAAC CCCCATACTG
CTGGCTGCAA TTGCACTCAC ATCAATACCC ATCCTAAGTT TAACCAAGTT AATGTACATT
GATGCATACG GTCTTTTAAC GCAACCTAAG AGTAAGTTAA GTAAAGCCAG TGATTCATTT
CCCCTTAATT CCTCAATATT CAGGATTATA CTTAATACTT CAGTTAAGCA AGGCTTCAAG
ATAGCATTAT CAGCATCAAT AGTAACGTTC GTAACCTTAA CTATCATTAC ATTAACCTTA
ACCACCCGCA TAATGAGAGG CCTTGAATTC CTAGTTTACC TACTTGGCTT CCTTATAGCA
TACATACATA CATCAATACT CGGTGGCACG TTGGCTCAGG AGAGGCCTTG GATTAACTTC
ATGGCTATGG ATGGGTTAAC TTACGTTAGG CTTAGGATGC TTTCAAGGCT AATAGTAACC
TACGCATTAT TAACACCCAT TATAGCTTAC TTACTGGTAT TATTCCTGGT TACTGAATCA
CCATTAGTAC TTCTTGAAGC ATTCTCAATA ATCTCCATGC CGCCGTTAAC CGTACCCACT
TCATGGATAA TAATGGCTGA GGCTAAACTA CCTCAATCAA GGGGTTTAAT TGAGGATAGT
CTACACAGGA GTAGCGTTAA GGTTCTGATT CTACTTGGTC TAATGTATGG TTTAGCTGGG
TTATTCCTAC TACCACTGGC TATGGAGAAC ATAATGATTA CCACAGGTTT AATACCGGTT
AATGAGGTTT CTAGATTCAC CTTAAGCATT GGTTTAATTG AATTAGCGGC ATCAGTCCTA
TACTATCTAC TCATCATGTA TAGTGGCTTC TCAGGGCGTG TTTGGCGTTG GTTTATTAGT
AAGCTTGCTG AGAATGGTTA CGTTTAG
 
Protein sequence
MYTSAILMLM LLILPLMFII RDESIRMLQT AAESYPIYVS LFLSIMLTVN ALSRRFISRI 
VIHDPGSQPL SALLTRTEID FILSSPFNIN ALIAIKLTID YIIPYALIIT FGSLLSLLLT
LMSIHNALML ITYVIIYVVN VVLLSTLLGL FNLIIPRTNN HYIDVTIPAV TSAYLLASSL
INPSLNPLLN MSNITLTPIL LAAIALTSIP ILSLTKLMYI DAYGLLTQPK SKLSKASDSF
PLNSSIFRII LNTSVKQGFK IALSASIVTF VTLTIITLTL TTRIMRGLEF LVYLLGFLIA
YIHTSILGGT LAQERPWINF MAMDGLTYVR LRMLSRLIVT YALLTPIIAY LLVLFLVTES
PLVLLEAFSI ISMPPLTVPT SWIIMAEAKL PQSRGLIEDS LHRSSVKVLI LLGLMYGLAG
LFLLPLAMEN IMITTGLIPV NEVSRFTLSI GLIELAASVL YYLLIMYSGF SGRVWRWFIS
KLAENGYV