| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0155 |
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| Symbol | |
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| ID | 5709404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 181704 |
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| End bp | 182711 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641274657 |
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| Product | H/ACA RNA-protein complex component Cbf5p |
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| Protein accession | YP_001539994 |
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| Protein GI | 159040742 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATG TACTTAACTG TAGTGGTGAA AGGATCATTA AGGTTAAGGT GGATGAGGGT
ACTGACCCAA GGTATGGTGT TAATCCTTAT GAAAGAAGGA TTGAGGAGTA CATTAACTAC
GGTTTCATAA TCCTTGATAA ACCAAGGGGG CCGACTAGTA GTGAGGTTGT TGCATGGGTT
AAGAAGCTGC TTAATATCAG TAAGGCTGGG CACTCTGGTA CACTTGATCC AGGGGTTTCT
GGGGTTCTCC CAATAGCTCT GGGTGATTCA ACTAAGGTAT TGCAAGGTAT AAGTAATGTT
GATAAGGAGT ACGTGGGTGT TATGCTCCTT CACTCTACTG TGGATCAGGA GAGGGTTAAG
GCTGTCTTCA GGGAGTTCAC GGGTAAAATA TATCAACGCC CACCCCTCAA GAGTGCTGTT
AAGAGGAGGA TTAGGGTTAA GACGGTTTAT AGCCTGGATA TAATGGAATT CGACGGTAGG
TACGTTTTGT TTAAGGCTGA TGTTGAGTCA GGGACTTACA TTAGGAAACT ATGCTACGAT
ATTGGTGAGG TTTTAGGTGT TGGTGCAAGC ATGAGGGAGT TAAGGAGGAC TAGGGTCGGT
TGCTTCAGGG AGGAGAATAC AGTTAACTTG AATACGTTAA GGGAAGCTTA CTCACTTTGG
AGGGATTACG GTGATGAATC ACTGCTTAGG AGGTTAATTA GGCCTGTTGA GGAAATGGTG
ATTCACCTAC CTAGAATCTA CATTAGGGAC TCCGCAGTGG ATGCAATAGC CCACGGTGCA
TCACTGGCGG CACCGGGGGT TGCTAAGGTT GAGGAGGGTA TTAGGAGTGG TCAATTAGTA
GCCTTAATGA CGCTTAAGGG TGAGTTAGTG GCGTTGGCTG AATCCACTGC CTCAACTAAT
GAGATACTTA ACATGAATAG GGGGATTGTA GCTAAGCCAA CTAGGGTTAT TATGCCTAGG
GGTGTTTATC CATCAACCTG GAGGAGAACC AGTAAGCAGG CCACGTAG
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| Protein sequence | MFNVLNCSGE RIIKVKVDEG TDPRYGVNPY ERRIEEYINY GFIILDKPRG PTSSEVVAWV
KKLLNISKAG HSGTLDPGVS GVLPIALGDS TKVLQGISNV DKEYVGVMLL HSTVDQERVK
AVFREFTGKI YQRPPLKSAV KRRIRVKTVY SLDIMEFDGR YVLFKADVES GTYIRKLCYD
IGEVLGVGAS MRELRRTRVG CFREENTVNL NTLREAYSLW RDYGDESLLR RLIRPVEEMV
IHLPRIYIRD SAVDAIAHGA SLAAPGVAKV EEGIRSGQLV ALMTLKGELV ALAESTASTN
EILNMNRGIV AKPTRVIMPR GVYPSTWRRT SKQAT
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