Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0145 |
Symbol | |
ID | 5709256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 172231 |
End bp | 173583 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641274648 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001539985 |
Protein GI | 159040733 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.570332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATT GCGACTTAAT AGATATGGCG TTCGTGGACT CTAACGCTAG ACGTAAGATT ATACAATACA TGCTTGATAA GGGCATTGAT CCACAGGACC TGGGTTTCTC AAGGGAGTAC ATTGAATCAG TGTTGAGGGG TAATGCTGAG GTGAATAACA TGCTTCTATG CGCTGCCTTA AGATTCATGG ATCTTGATGA GTTGAACCGA GTAATAGGCT ATGTACCGAG GATGGCCACT GAGGATGATT TAATAATGGT GATTAGTAGG GCTAAGAGGG ATGAGGCCTA CAGGAGGCTA TTACTTGAAG CTGTTAATAG GGCGTTTAGG GAGGAGCAGG CTAAGGGTAG TGAGGTCACT GTTAGTGGGT TGGGTTACGT TAAGTATAAG CTACCTGACC TCGCCTTAAC CATAGCTAAG CTTGAGAGGA AACTCCCTGA AAGAACCATT GGAGCGATTC TTTGGTCCAT TAAGACAATC CTAATGCTAT TCGCTGAATT AGTCTTCGCA CTAGCCATAG CCTTCTTCAT AATACACGCA GTGCCTGGTG CAGGTCACCT AGTGGATCCT GTTAATAGTT TTCTAAGATT CCTACTAATG GTTCTCCACG GTAACTTAGG TTGGTCAAGG ACCTATGGGG CTCCTGTGGC TGAGATAATA GCCCTTGCCG CCCCCTGGAC CATAACCATA GCAACCATAT CCCTAACCCT AGCCTTCATA ACAGGCTACA CACTCGGCTT AGTCAGCGCC TCTAGGACTG GTATCATTGA CTCATTTATT AATGGTTTAG CCGCCTTCGC TCAATCAGTT CCATCATACG TAATAGCGTT AACCCTCATA GTTGTCTTTG GGGTGGTGCT TAAGATACTG CCAATAGCTG GTATTAATTC CATGGGGATT AAGCCTGGGG TAAGCATATT CTATTTCATT GATGTTGCTA AGCATTTAAT TTTACCAATA TTCTCATACT ACATAATACT GTTTCCGAAT TGGGTCTTCA TTACGAGGAG CTTAGCGACA ATGACCCTTA CTGAGGATTA TGTTTTAACA GCTAAGGCTA GGGGGTTACG TGAAAGGAGA ATACTTAACT CTTATATTGG TAAAAATTCA ATACTGCCTC AGTTAACCTT ACTGGCTTAC TCCTATGGCT TACTCTTCGG TAATAGTGTA TTTATTGAAA CAATGTTCGC AATACCTGGA TTAGGCTACT TAATTAGTGT GACTGCAGGT ACCTCAGACT ACATGACTAC CGTGGGAGCC TTCATGGTTA TAATAATATC CGTGATCATA GGTAACTTCA TAGCTGATTT AACGTATGGA CTAGTGGACC CAAGGATAAG GGGGGTTGTT TAA
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Protein sequence | MVDCDLIDMA FVDSNARRKI IQYMLDKGID PQDLGFSREY IESVLRGNAE VNNMLLCAAL RFMDLDELNR VIGYVPRMAT EDDLIMVISR AKRDEAYRRL LLEAVNRAFR EEQAKGSEVT VSGLGYVKYK LPDLALTIAK LERKLPERTI GAILWSIKTI LMLFAELVFA LAIAFFIIHA VPGAGHLVDP VNSFLRFLLM VLHGNLGWSR TYGAPVAEII ALAAPWTITI ATISLTLAFI TGYTLGLVSA SRTGIIDSFI NGLAAFAQSV PSYVIALTLI VVFGVVLKIL PIAGINSMGI KPGVSIFYFI DVAKHLILPI FSYYIILFPN WVFITRSLAT MTLTEDYVLT AKARGLRERR ILNSYIGKNS ILPQLTLLAY SYGLLFGNSV FIETMFAIPG LGYLISVTAG TSDYMTTVGA FMVIIISVII GNFIADLTYG LVDPRIRGVV
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