| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2315 |
|---|
| Symbol | |
|---|
| ID | 6355660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2545348 |
|---|
| End bp | 2546166 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642669906 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001944317 |
|---|
| Protein GI | 189347788 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TGTTCGCCTA TGAATTTTTA CGTAACGCCG TACTCGCATC TCTGCTTGCC
AGTGTTGCGT GTGGCATTAT CGGCAGCTAT GTCGTGGTGA AAAAAATCGG ATTCATCAGC
GGCGGCATAG CCCATACCGC ATTCGGCGGG ATAGGACTCG GTTACTATCT CGGGATTAAC
CCGCTCTTCG GAGTCATTCC GTTCAGTCTC GGTGCCGCCA TTGCCATCGG TCTTCTGAGC
AGAAAGGCGA AAGTTGCCGA AGATACGGCG ATAGGGGCAT TCTGGGCTGT CGGTATGGCT
GTGGGCGTTA TTCTGATCGG TCTCACGCCG GGGTACGCTC CGAATCTGTT CAGCTACCTG
TTCGGCAATA TCCTGACGGT TTCTGTGGCC GATCTGTGGA TGATCGCCGT GCTTGATATC
CTGATTGCCG CATTGACCTG GCTTTTCAGC AAGGAGTTTC TCGCTCTTTC ATTCGATGAG
GAGTATGCCG AGGTTTCAGG GGTGAAAACC ACCCGGTTCT ATCTGCTGCT GCTCTGCCTG
ATAGCGCTTA CCGTCGTGAT TCTTGTACGG GTTGCAGGTA TTGTGCTGGT TATCGCCCTG
CTTACCATTC CAGCAGCCAT AGCACGGGTT TTCAGCAGCA CTCTCCGGGG TATGATGGGT
CTGGCGACGG TACTTTCAGC TCTTTTCTGT CTTGGAGGCC TCTGGCTCTC CTGGCAGCTC
GATCTTGCAT CCGGGGCAAC CATTATCGTA TTTGCCGGTA CCGTATTTCT TTTGGTCCAT
GCCGGTCGTT CGTTCATTTC CTTCCTGAAG GCACGATGA
|
|---|
| Protein sequence | MPDLFAYEFL RNAVLASLLA SVACGIIGSY VVVKKIGFIS GGIAHTAFGG IGLGYYLGIN
PLFGVIPFSL GAAIAIGLLS RKAKVAEDTA IGAFWAVGMA VGVILIGLTP GYAPNLFSYL
FGNILTVSVA DLWMIAVLDI LIAALTWLFS KEFLALSFDE EYAEVSGVKT TRFYLLLLCL
IALTVVILVR VAGIVLVIAL LTIPAAIARV FSSTLRGMMG LATVLSALFC LGGLWLSWQL
DLASGATIIV FAGTVFLLVH AGRSFISFLK AR
|
|---|
| |