| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2203 |
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| Symbol | rpsD |
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| ID | 6355997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2443471 |
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| End bp | 2444082 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642669794 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001944206 |
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| Protein GI | 189347677 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000224183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT TTAGAGGCTC AATAACAAAA GTATCGCGTC GGTTGGGTGT TGCGCTTTCA
CCGAAAGCTG AAAAATATCT TGAAAGAAGA CCATTCGCGC CAGGACAGCA TGGACAGTCG
CGGAAAGGGA AGGTTTCTGA GTATGCGCTG CAGCTCAGAG AGAAGCAGAA GATGAAATAT
CTTTACGGCA TTCTCGAAAA ACAGTTCAGG AACTACTATA AGAAAGCAGT GGCACAGAGG
GGTGTTACCG GTGACAACCT TGTCAAGCTT CTTGAGAGGC GCCTGGATAA TGTGGTTTTC
CGTTCAGGTT TTTCCGCTTC CCGTGCAGGT GCCCGTCAGC TTGTTTCTCA TGGTCATCTT
GTCGTGAACG GTAAAAAGGT CAATATTCCT TCATTCCAGG TCTCACCGGG CGATCTCATA
GAGTTTCGCC AGAGAAGTCG CAATATGGGC GCTGTAACCG ATTCGCTCAG CAAAGCTCCG
GAATCCCGTT TTCCTTCATG GATCCAGGTG GATAAGGCTA ATCAGAAAGC CGTTTTTCTC
AGTGTTCCTG AGCGTGAGGA TATTCAGGAG CCGTTCAATG AGCAGCTTGT AGTTGAGTTG
TACTCTAAGT GA
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| Protein sequence | MARFRGSITK VSRRLGVALS PKAEKYLERR PFAPGQHGQS RKGKVSEYAL QLREKQKMKY
LYGILEKQFR NYYKKAVAQR GVTGDNLVKL LERRLDNVVF RSGFSASRAG ARQLVSHGHL
VVNGKKVNIP SFQVSPGDLI EFRQRSRNMG AVTDSLSKAP ESRFPSWIQV DKANQKAVFL
SVPEREDIQE PFNEQLVVEL YSK
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