Gene Clim_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2165 
Symbol 
ID6355959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp2403508 
End bp2404098 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID642669756 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_001944168 
Protein GI189347639 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCG TTCTTCTTGA TATCGGCAAT GTGCTGGTCG ATGTCGATTT CACGGTTTTC 
TGCAGGAAGG TATCACGGCA TGGCGAAAAC GGAGCGGAGG AACTCTATGG CCGGTATTGC 
GTGAGTGAGT TCAAAGATCT GTTCGATAAA GGCGCGATCG CTCCGATCGA CTATCTTGAA 
ACGATTGCCG GCGATCCGGA AACCCGACCC ATGACGATCC GGGAGCTGAA AACGGCATGG 
CAGGATATTT TTTCCCCTAA AAACGAGGCT CCGGAGTCGG TGCGTGAGAT GATGCTGAGC 
CATACGGTCT GGATCATGAG CGACACCGAC CCGCTCCATT TTACCGCACT TCTCAATAAT 
GTGCCGGTAT TGAGAACAGC CGAACGTTAC TGGCTCTCTT TTGAACACGG TTATCTCAAG 
AGGGAACCGG GTGCGTTTCA TGAGGTGCTT TCCTGTTCCG GACAGAACGC AAAACAGTTC 
GTGCTGATCG ATGACCGCGA AGATAACTGC CAGTGCGCCG AATCATGCGG CATCAAGGCA 
GTTCATTTCA GGGACTGGAG TCAGGCGCTT CAGGAGCTGC AGGATTTATA A
 
Protein sequence
MSVVLLDIGN VLVDVDFTVF CRKVSRHGEN GAEELYGRYC VSEFKDLFDK GAIAPIDYLE 
TIAGDPETRP MTIRELKTAW QDIFSPKNEA PESVREMMLS HTVWIMSDTD PLHFTALLNN 
VPVLRTAERY WLSFEHGYLK REPGAFHEVL SCSGQNAKQF VLIDDREDNC QCAESCGIKA 
VHFRDWSQAL QELQDL