Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2106 |
Symbol | |
ID | 6355084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2320841 |
End bp | 2324824 |
Gene Length | 3984 bp |
Protein Length | 1327 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642669697 |
Product | hypothetical protein |
Protein accession | YP_001944109 |
Protein GI | 189347580 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGACAG TTCCTTACAT TGACAGACAC CTCAGGTTAG AGAACCAGCA GATTTCCACG GATGAGTTTA TCGATAAACT TGGAGTAGCC GTAGTCCTTG CTGAACCGGG TGCCGGAAAA ACACGATTGC TTGAGCAATT GAGAGAGTTG CTTGATGTTC CGATTTATCG GGCAAGCATA TTCAGGCATA AAAACCAAAT TGAATGGCCT GATCCACTTC TTATCGATGC TTTCGACGAA GTTGCAAAAA TGGATTTGTC AGCCATTGAT CAAATCATTG TCAAAGCAGC TGAGAGTGGG ATACAAAGAG TGATTTTTGC CACACGGTCA AGCGAATGGG CGGAATCGCA AACCAAAACT GTAAGAGATT CTTTCTCGCT TATTCCCCTT CTGGTCTATC TGGAAGCATT CTCCCTACAA GAACAACAAC AATATTTTAA TGCTTACGCT CCCGGATATG ATTTTTATGA ATTTTATTTA GAAGTCGAGC GAATGCAGTT GCAACCTCTT GCTGGCAATC CAAAATTCTT GGAGATGCTG GTGGATGCAT ATTTTCAAAA TAATAAACGG TTTGAATCAA AGGCCCAAAT TTATCATGAT AGCATACATT CCGCAGCCCG AGAGAGTAAT GCAATAGCAT CGTGTAGAAA CAGGCCATCG GCAGAAAAAA CGATAGAAAT AGCAGCGGAA ATATTTACAA AACTGCTTCT CTCAGGTGCA TCAGGAGTTG CAATCTCTGA ATTCATCGCA AGCATTGATT ATCCGTACCT TAACTCGATT TCAGATAACC TAGCAATAGA TCCTTGGCAT GTTCTCGATA CCAAGCTATT TAAGCCTGGT AGTCACACTG ATCAGCATGA ACCATCTCAC AAAATCATTT CAGAATATTG TGCTGCCCGC TACCTCACGG ATAAAATAAA GGATCAATCG GATCTTTTTA GCCTCGAACA ATGTCTTGCA ATTATGGCCC CGAATGGGGT GATAAGGGAC GAACTGCGAG GATTACTGGG CTGGATGGCA ACCTTTGGAG ATCGTACAAT TCAGGAAAGA GCCATCGAAA TAGATGCTTA TGCGGTTCTC GCCAATGGAG ATCCATCGCA ACTTGACATC TCTTCAAAAC ATCTACTGTT AAATGCGCTC AAGTCACTAT GGGAAAAAGA CCCCCATTTT AGACGACTGG ATCAGTGGAG GCGCTTTAAC GTGAGCGGCT TTTTTACTCC CGAGCTGATT GCAGAGGTTG GCGTTCTTAT TGATGGGCGA ACTCCTAAAT CATCGCTGAC GGGACTGTTA TTGGAACTCT TGCAGGATTT CAGTGACTTT ACTCCTATCT CAAAACAACT CAAAGCAATT TTGCTTGATC AAGAAGAGAA TGAAAGCAAT CGTGAAATGG CCCTAAACCT GCTTAAAGAT GCAGATATCG ATGAGTCTCG CAAAATCTTT CAAATCTTGA TCGCTGAAGA CACAAGAGAT TCGCTTTTTT TGGTTTCACG TTTAGTAGCT TCGATTGGAA TAAGCCGATT TACTGACGAG GACTTACTCC TTTTCATAAG GAAGCTAGCT GATTTTTACA ACCCAAAACT AAACAAGCAC TATAAGTCAG TGTTTTTCAT CAAGGATTTT ATCCGGCTCC TTGAAAGCAA ACAATGCGAA TTTCTTTTAG ATGAACTCAG TGAAACGCTT GTCTGTATGC GACTTGACAC CAGTAATGAT GATGCGTGGA TGCGCAACGA AGCAGAGAGC AAAGTCATCG GGTTATTATT AGATCGATTT TTTGAACTTC ATCCCAGAAC AGATAATCCT GAACGCCTTT GGCGCTGGAC AAAGTGTCTT CGATATGAAC ATCACAAAAA CGAAGGTGAA AGTATATCGG TCAGAGCCCT TGCAAACAAT CACGATCTTC GTCGATCAGT TCAGCAAATT GCCTTTTCTG GACTCAATGA TCAAGATGAG ATATGGTCCC TTATGCACGA GTCTTTTATT TTCCATGCGC ATTCAGGCTT AAGGTTCATA CAGTATGACA TGGAAGCACT CGCGCAGTTT GCATTTGAAA CCAAAAATCT GCCTCTTTGG ACAACACTCT GGAAAGGCCA CAATATTTAT AGCAAGGAAC ACGCTGTCGA TCCTTTAAGG AGACTGATGC GTTCACATTC CAGACAAAAT CAAGATTTTC TAAAAGCCTG GCACAAAAGA AAGCACGAAT GGAATGAAAA GAAGGCTTTT TTTAACGGGC GTCGGCACAA ACGCACTTCA AAACGCTGGA AACTTAAGGA AGAGAGGAGA AAGCAAAACA ATAGAAGCAA CTATGAAAAG AATAAGGAAC TGATTGAGTC AGGTCAACAT TATGGGTGGC TAAAGATATT CGCAGATCTG TATTTGTTCC AAGATAGGAC TGAAAATGAC TTTGCTTACG TTGATGATGC AAGCATTGAA AAAGCGCTCC GCAATTGTTT TACTTTTCTC CAAGATCACA TTCCAACACT GAAGGAGGCT GCATTATGGA AAAACGCAGA CTTACTTCGT GTTTTAAGTG CAGCCTGTTT AGCTCATTTC AAGTATCAAG GGAATTTAAG TGCGATTGCC ATTCCTGTTC TACGAATCGT AAAAGCAGAT TGGCAAGGCT ATTTCGGCAT ATCCGAAAAA GAAAGTAAAG CATTTGAACA GGAAATTAGT CGCTCGATCT TCATGGACGA ATCCTCAAAA AGGAATTTTC TGATTGAATA TCTTACTCCC CAGTTTGCGA ATCAGGAACA CAGTGATGCA CCTCGGCTGC TCGAAAAGCC GGAGTTTAAA GATGGTCGTG CAGAATTGGC ATTGGAATGG CTTGAAATCC AGTCAAAAAT TCCATTTCAT ACAGCCGAAT ACCTTTTCAG ATTAGCCGCC ACGCATCCTG ATAAGAATAG ATTTTCACAA ATGGTAGCGA AAAAATTTGA TGAGTCTAAA TCCGAAAAGG AGCGTGATGG CAAGAACCCG GTATTATATG GATTTTGGGC GCTTAGAGCT TTCCTATACC TCGGTTTTGA AGAATCCTCA GCCAAAAACT GGCTTAAAGA GGACAAACGC AATATTTTTG GCCTCGAACA TCTATTAGGA ACATGGGACA GAGAGGAAAA CGCTTTTTGG ATTAATCTTA ACGCGAGAAA AATCTATCAT ATTCTCGATA CATATGTTGA TGAGTGGCCT AAAGTATTTT TGCCAAACTC ATGGGGGACT GACAGTCCAG AAAACGAAAC AGCATATCGC TTTTTAACAG ATATAATATG GAAATTCAGG GAGGCTAACC CAGAAGAAGC ACTTCCGTTA CTTGATAAGA TGTTGGAAGA TCAGCGTTTC ACTGAATTTC ACAATGTAGT CAAGACACTG AAAGAAACCG CCCGAAGAAA AAAAGCATTG CATGATTTTC GAGCACCTAC ACCAGAGAAT ATCTGTGCAT TTCTGGAAAG CCGGAAAATT GTCTCGGTTG AAAATCTGAG GGCCTTGTTG ATTGATGAAT TACGAGCATA TCAAAAATGG CTTACAGGTG CATCAACCGA CCCCGTCGAG GTTTTCTATG ACGGTAGCAA CCATGTGAAT GAAACGACTG CATCAAAAAG GGTAGTCGAG GATTTACAGA ACCGTTTTAA TGCCCTTAAT CTATCGGTCT CGATAGAACA CCACATGGCA AATAGTAACA GATGTGACAT TACGGTTACG ACCGTGATCG ATGGTAGAGA AATCATGCTT GTTATCGAGG CAAAGGGACA ATGGCATCAG GAGCTGTTTG CAGCTGCCAG TTTCCAGTTA AGCGAACGAT ACTGCATCCA TCCGAGCGCA GCAGATCAGG GGGTCTATCT CGTGTACTGG TTCGGTCAGC GTGTAGAGGT TGAAGGCAGA GTCAAACATC ACATCGCTTC ACCCGAAGAG CTACGAAAGC AGCTTATCGA TTCAATGGAT GAAGCACTGA AATCAAAAAT TGATGTTTTC GTTCTTGACT TATCCAAAAG TTAA
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Protein sequence | MATVPYIDRH LRLENQQIST DEFIDKLGVA VVLAEPGAGK TRLLEQLREL LDVPIYRASI FRHKNQIEWP DPLLIDAFDE VAKMDLSAID QIIVKAAESG IQRVIFATRS SEWAESQTKT VRDSFSLIPL LVYLEAFSLQ EQQQYFNAYA PGYDFYEFYL EVERMQLQPL AGNPKFLEML VDAYFQNNKR FESKAQIYHD SIHSAARESN AIASCRNRPS AEKTIEIAAE IFTKLLLSGA SGVAISEFIA SIDYPYLNSI SDNLAIDPWH VLDTKLFKPG SHTDQHEPSH KIISEYCAAR YLTDKIKDQS DLFSLEQCLA IMAPNGVIRD ELRGLLGWMA TFGDRTIQER AIEIDAYAVL ANGDPSQLDI SSKHLLLNAL KSLWEKDPHF RRLDQWRRFN VSGFFTPELI AEVGVLIDGR TPKSSLTGLL LELLQDFSDF TPISKQLKAI LLDQEENESN REMALNLLKD ADIDESRKIF QILIAEDTRD SLFLVSRLVA SIGISRFTDE DLLLFIRKLA DFYNPKLNKH YKSVFFIKDF IRLLESKQCE FLLDELSETL VCMRLDTSND DAWMRNEAES KVIGLLLDRF FELHPRTDNP ERLWRWTKCL RYEHHKNEGE SISVRALANN HDLRRSVQQI AFSGLNDQDE IWSLMHESFI FHAHSGLRFI QYDMEALAQF AFETKNLPLW TTLWKGHNIY SKEHAVDPLR RLMRSHSRQN QDFLKAWHKR KHEWNEKKAF FNGRRHKRTS KRWKLKEERR KQNNRSNYEK NKELIESGQH YGWLKIFADL YLFQDRTEND FAYVDDASIE KALRNCFTFL QDHIPTLKEA ALWKNADLLR VLSAACLAHF KYQGNLSAIA IPVLRIVKAD WQGYFGISEK ESKAFEQEIS RSIFMDESSK RNFLIEYLTP QFANQEHSDA PRLLEKPEFK DGRAELALEW LEIQSKIPFH TAEYLFRLAA THPDKNRFSQ MVAKKFDESK SEKERDGKNP VLYGFWALRA FLYLGFEESS AKNWLKEDKR NIFGLEHLLG TWDREENAFW INLNARKIYH ILDTYVDEWP KVFLPNSWGT DSPENETAYR FLTDIIWKFR EANPEEALPL LDKMLEDQRF TEFHNVVKTL KETARRKKAL HDFRAPTPEN ICAFLESRKI VSVENLRALL IDELRAYQKW LTGASTDPVE VFYDGSNHVN ETTASKRVVE DLQNRFNALN LSVSIEHHMA NSNRCDITVT TVIDGREIML VIEAKGQWHQ ELFAAASFQL SERYCIHPSA ADQGVYLVYW FGQRVEVEGR VKHHIASPEE LRKQLIDSMD EALKSKIDVF VLDLSKS
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