| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2048 |
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| Symbol | |
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| ID | 6355026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2257537 |
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| End bp | 2259288 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642669644 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_001944056 |
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| Protein GI | 189347527 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC GGGAAATCAC CTCGCTCTGG AGCCGCATCA TCATAGAAGA GCTCGTTCGT
CTCGGCGCAG GCTTTTTCTG CATCTCTCCG GGCTCCCGCT CAACTCCCCT CACGGTCGCT
GCGGCACGCC ACCCCGAAGC TGCGTGGAAA ATGTTTCCTG ACGAACGCTC CGCCGGCTTT
TTCGCGCTCG GCTATGCCCG TGCCACCCAA AAACCTGCCG TGCTGATCTG TACGTCAGGC
ACTGCCGTAG CCAACTACTA TCCTGCAGTC GTTGAAGCGT CGATGGACTG TCAGCCCATG
CTGATCCTTT CCGCCGACAG ACCGTTCGAA CTGCTCGAAA CCGGCGCGAA CCAGACCATT
CAGCAGTTCG GCATATTCGG CGGTTACAGC CGCTGGAACT TCAGACTTCC GGAACCCTCG
TCAGACGTTC CTCTCCGCTC GGTCATCACG GCAATCGATC ATGCCGTTTC ATCGGCAACC
GGCTCGCTCC CCGGACCGGT ACATATCAAT GTCCCTTTCA GGGAGCCTTT CGAGCCGCTC
GATCCCGACC TCCATGATCC CTGGCTTGCC CCGGTTTCGG AGTGGATCGA CACGTCGACT
CCGCTCTGCC GAACCCTGAG CCAGGAACGT GTACCGAACC GCGAGAGCAT TTCATCGCTC
CGAAAAATTA TTGCCGAATC GAAACTTCCG TTCATGATTG CCGGCAGACT GAACAACCGT
TCCGACTCCC TTGCCGTAGG CAACCTGGCC CGGTCGCTCA ACATTCCGCT CTATGCGGAT
CTCTCTTCGG GACTGCGGCT CGACAGCTCT TTCAATCCAT TGCAGCTGGC CTTTCAATCC
TCGCAGTTTC CGGAAAGATT CCGGCCCGAT ACGGTCATTC ATTTCGGAGG GCCGCTCGTT
GCCCGGCAAC CATCGGCAGC AGTCAGAATG TGGAATCCCC GTAACCACAT TGTCATCAAA
CCGCATGCCA ACCGTTTCGG CCCTGACCAC AATATCACAC TCAGCATCGA AGCCTCACCC
GCTCTGATTG CCGAAGCTCT CCTCGGCTGC CGCACCCCGC TCCCTTCCGG CTGCCAGCCG
CTGCCGGAAC CTTTTTTTCA GCAGGCAAAG GCTGAAATCG ACATCTGCTG CCTGCCCGAT
CATCCGGTTT CGGAAATTTC AGCAGCGAGG ATAGTCTCTT CGCTCGTCAC CCCGGAATCG
GGACTCTTTC TTTCAAACAG TATGCCGGTG AGAGATATGG ATCTCTATGC TTCACCGTCC
GCTTCCCGGC CGTTCATGAC CGGCATGAAC CGGGGAGCAA GCGGTATCGA CGGCATTATC
TCTACCGCGG CAGGATTCGC GAAGGGACTC CGGAAGCCGG TAACCCTTAT GATAGGCGAT
ATCGCCTTCC TGCACGATCT CAATGCGCTC AGCCTGCTGC CGTCACTTCA GGTTCCGTTA
TGCATTGTTG TTTTGAACAA CAACGGGGGG GGAATTTTTT CCTTTCTCCC CGTCGCCTCG
GAAAAGGATG TGTTTGAAAC CTGTTTCGCC ACCCCCCAGA GCTACAGCAT CAAAGCCGCT
GCGGAGACAT TCGGTATAGA AAGCAGCAGA CCGGCGACAA ACCGCGACTT CGAGGAGTGC
TGCAGAAAAG CTGCAGAGAG CGACCGCTGT TCCATCATCG AAGTGAAAGG AAACCGCCGG
AACAATGTAG AGCTGCATCG TACCCTTCAA TCGAAGATCA CCGCTCTCGG CGCAAGCTAT
CTCTCACGAT AA
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| Protein sequence | MNNREITSLW SRIIIEELVR LGAGFFCISP GSRSTPLTVA AARHPEAAWK MFPDERSAGF
FALGYARATQ KPAVLICTSG TAVANYYPAV VEASMDCQPM LILSADRPFE LLETGANQTI
QQFGIFGGYS RWNFRLPEPS SDVPLRSVIT AIDHAVSSAT GSLPGPVHIN VPFREPFEPL
DPDLHDPWLA PVSEWIDTST PLCRTLSQER VPNRESISSL RKIIAESKLP FMIAGRLNNR
SDSLAVGNLA RSLNIPLYAD LSSGLRLDSS FNPLQLAFQS SQFPERFRPD TVIHFGGPLV
ARQPSAAVRM WNPRNHIVIK PHANRFGPDH NITLSIEASP ALIAEALLGC RTPLPSGCQP
LPEPFFQQAK AEIDICCLPD HPVSEISAAR IVSSLVTPES GLFLSNSMPV RDMDLYASPS
ASRPFMTGMN RGASGIDGII STAAGFAKGL RKPVTLMIGD IAFLHDLNAL SLLPSLQVPL
CIVVLNNNGG GIFSFLPVAS EKDVFETCFA TPQSYSIKAA AETFGIESSR PATNRDFEEC
CRKAAESDRC SIIEVKGNRR NNVELHRTLQ SKITALGASY LSR
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