Gene Clim_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_2006 
Symbol 
ID6355510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2225866 
End bp2226621 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content53% 
IMG OID642669604 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001944017 
Protein GI189347488 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0118677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG AACAGGTAAC AGCACAGGTA CGGAAGGAGA TCCACTGCGT TCTGCCGGCG 
GGAGACCGTT CATCCCTTGC CATCCTTGTG CTGTTCATCC TTTTCGTGGT CTCGGTCCCG
AAAAACAATC TGCCGGCGGT AATCGCCTAC GGCGCGTTTC CCCTTTTCTT CATAATCTCA
GCCGGACTGC CGTTGCGTCC CGTCATGAAA CGGATGATGC TGATCTCCCC GTTTCTGCTG
TTCATGGCGG CAGGAAACAT CTATTTCGAC AGGCTTCCCG TTTTTACAGC CGGAAGTATT
GCCATAACCG GAGGAATGAT TTCCGGCAGC GTAATTGTAG CCAAAGCTCT TGTCACCCTT
GCCGCCGTGC TTGTATTCTC CTTCTGCGTT CCGTTTCACC GGTTTGGAAA CGCATTGCGG
GGTTTCGGTG TTCCTGAAGT TTTCATCACC CAGTTGCAGC TGGTTTACCG GTACAGTTTT
CTGCTCGTCC CTGAAGCCCG ATCACTGCAG AAAGCACGCG ATCTCCGATC ATTCGGCAAC
AGGGGAAAAG ATCTTTTTAC AACAGCGAAA CTGATCGGCT CGCTACTTGT AAGAACAACT
GCACGAGCCG AAAGAATCTA CATGGCCATG ACAGCCCGGG GATTCAGGAA CAACCTGTCC
GCAGAGCATA CCAGCCCGTT TACGGCAAAG GACGGTGCTG CAGTCGCGAC TGCCCTGTTC
TGCCTTACCG CAGTCTGGCT GCTGTTCCGG GTATAA
 
Protein sequence
MNIEQVTAQV RKEIHCVLPA GDRSSLAILV LFILFVVSVP KNNLPAVIAY GAFPLFFIIS 
AGLPLRPVMK RMMLISPFLL FMAAGNIYFD RLPVFTAGSI AITGGMISGS VIVAKALVTL
AAVLVFSFCV PFHRFGNALR GFGVPEVFIT QLQLVYRYSF LLVPEARSLQ KARDLRSFGN
RGKDLFTTAK LIGSLLVRTT ARAERIYMAM TARGFRNNLS AEHTSPFTAK DGAAVATALF
CLTAVWLLFR V