| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1967 |
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| Symbol | |
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| ID | 6355471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 2182981 |
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| End bp | 2184837 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642669565 |
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| Product | Carbamoyl-phosphate synthetase large chain domain protein |
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| Protein accession | YP_001943978 |
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| Protein GI | 189347449 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000143423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTC AAGTTTCCAG CCTTTCACAA GAGCTTTCCG GCCTTGCGAG CAAACTCCCT
AAAAAAACGC TGATAAAGGC AAAAGAGCAT GGATTTTCCG ATTGTCAGCT TGCCAATATT
TTTAAAACCA CGGAAACCGT CATACGAACA CTGAGAAAAC AGTACGGTGT GGAATCGGTA
TTCAAAACCG TCGATACCTG CGCTGCCGAA TTCGACGCGA AAACCCCGTA CCATTACTCG
ACGTACGATG AAGAGAACGA GTCTGTGCGT TCCGACAGGA AAAAAGTCAT TATCCTCGGA
GGCGGCCCGA ACCGTATCGG TCAGGGCATA GAATTCGATT ATTGCTGCGT ACAGGCGGTT
TTCGCTCTCC GCGAGGCCGG CTATGAGACC ATCATGGTCA ACTGCAACCC CGAAACGGTT
TCGACCGACT ACGACATCGC CGACAAGCTC TATTTCGAGC CATTGACGTT TGAGGACACG
ATCCGTATCA TCGAGCATGA ACAGCCGCTC GGTGTGATCG TCAGCTTCGG AGGTCAGACC
CCCCTGAAGC TCTCGACAAA ACTGGACGAG GCCGGCGTTA CCATTCTCGG AACATCCTCG
AAGGGCATCG ATCTTGCGGA GGACCGCAAG AAATTCGGCG CTCTGCTCGA AAAACTCGAC
ATTCTCCATC CGGATTACGG CACCGCCATC TGTTTTGATG AAGCGCTCGC CATTACCGAA
AGAATCGGGT ATCCGGTTCT GGTTCGACCA AGCTATGTGC TTGGCGGAAG AGCCATGAAA
ATCATCTATA ACAAAGACTC TCTCAAGGAG TACGTCGATC AGGCGCTTTT CATTTCTGAA
AAATATCCGC TGCTTATCGA CCGATTCCTT GAAACTGCCG TTGAGTTCGA CATCGATGCC
ATTGCCGATA CTACCGACTG CGTTATCAGC GGCATCATGC AGCATGTGGA GGCGGCAGGC
ATTCACAGCG GCGATTCAAC CTCGATCCTT CCCTATCGCA ATATCAGCCA GGAAGTGATC
AATACCATGA AAGCCTATAC CAGGACGCTT GCCGAACATC TGAAGGTTGT CGGCCTCATG
AACGTTCAGT ATGCCGTCCA GAACGAAAGC GTTTACGTGA TCGAAGTGAA TCCGAGAGCG
AGCCGTACGG TGCCGTTCGT TGGCAAGGCC ACTGCGGTTC CGGTTGTAAA AATCGCAACG
CGGGTGATGC TTGGCGAGAA ACTCAGCGAC CTTCGCAAAG AGTACGATCT GAAGGATTGC
GACGAACTCG GCATGAAGCA TATGGCCATA AAGGAGCCGG TATTTCCATT CTCGAAGTTC
GTTAAATCAG GCGTTTACCT CGGCCCGGAA ATGCGCTCCA CCGGCGAAGC CATGAGCCTT
GCAGAACAGT TTCCGGAGGC TTTCGCCAAA GCGTATCAGG CTGCGAACAT GGAACTTCCG
CTTTCAGGGT CGGTCTTTAT CAGCGTAAAC GATCAGGACA AAAGCCAGCG CATTATCGCG
ATTGCCAAAG AGCTTTACCG CATGGATTTC GATCTTGTCG CCACGGCCGG AACCCACCGT
TTCCTTATCG AAAACGGAAT AGAGTGCAAA AAAGTCTTCA AGGTAGGCGA AGAGGGGCGT
CCGAACATTT TCGACATCAT CAAACACGGC AAGATCGATT TTGTCATCAA CACACCCAGG
GGGGAAAAGG CGCTGCATGA CGAGGAGGCT ATCGGCGCGG CATCGGTACT GAGCAACGTG
CCGTTCGTCA CCACCATCGA GGCCGCCGAA GCATCGGTTC AGGCTATCGA CTGCATCCGG
CGCCAGGAAT TCGGTGTCAA GAGTCTGCAG GAGTATTCGG CATATCGAAA CAAGTGA
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| Protein sequence | MTTQVSSLSQ ELSGLASKLP KKTLIKAKEH GFSDCQLANI FKTTETVIRT LRKQYGVESV
FKTVDTCAAE FDAKTPYHYS TYDEENESVR SDRKKVIILG GGPNRIGQGI EFDYCCVQAV
FALREAGYET IMVNCNPETV STDYDIADKL YFEPLTFEDT IRIIEHEQPL GVIVSFGGQT
PLKLSTKLDE AGVTILGTSS KGIDLAEDRK KFGALLEKLD ILHPDYGTAI CFDEALAITE
RIGYPVLVRP SYVLGGRAMK IIYNKDSLKE YVDQALFISE KYPLLIDRFL ETAVEFDIDA
IADTTDCVIS GIMQHVEAAG IHSGDSTSIL PYRNISQEVI NTMKAYTRTL AEHLKVVGLM
NVQYAVQNES VYVIEVNPRA SRTVPFVGKA TAVPVVKIAT RVMLGEKLSD LRKEYDLKDC
DELGMKHMAI KEPVFPFSKF VKSGVYLGPE MRSTGEAMSL AEQFPEAFAK AYQAANMELP
LSGSVFISVN DQDKSQRIIA IAKELYRMDF DLVATAGTHR FLIENGIECK KVFKVGEEGR
PNIFDIIKHG KIDFVINTPR GEKALHDEEA IGAASVLSNV PFVTTIEAAE ASVQAIDCIR
RQEFGVKSLQ EYSAYRNK
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