Gene Clim_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1940 
Symbol 
ID6354995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp2151485 
End bp2152510 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content51% 
IMG OID642669538 
Producthypothetical protein 
Protein accessionYP_001943951 
Protein GI189347422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA AAGCCATTAT ATTTTTCGCA GCAGCGCTGT CTGCCGCCCT GCTGCTTGCC 
GCAGTTATCA CCGTCAACCA GCTTGCCGCG TTCAGCGCAT TGCTTGCAGG ATTACATCCC
TATGCAGGTT ATGCGTTTCT CTCGTTCTCG TCGCTGCTTA TTTTGTTTGC CCTGATAACC
GGCATTGTTT TTTTCTCTTC TCCTTCCAGA CCGGAACTGC CTCTGAATGA AACCGCAAAA
CAGTTTTCAG CATATCTGGC TTATCTGGCA AAAACCCTTC CCGCACACTC CATGCACCCT
GAACCGCTCC GCAGGGAGAA GGATCTGCGA TGGCTCCGCG CCAATCTGAA ACTGCTCGAG
GTCGATGCGC TGAATGCTAC AAAACAGATT GCGACAAAGA ATTTTTTTGT CGGAGCTTTT
GCACAAAACA CCTCGTATGG CACAACGACC TCCCTCATGA ACATTCTGAA AGTGGTCTGG
AACACTTACA GGATCCATCA CCGGACCCTT CATGCCATGG AGTTCGCCGC TCTGGTGCGG
TCGGTTTATG CCTGCCTGCC TCTGTCCGAC TTTAAAAAAG AGGATATACC GGCACATATC
AAACCGATCA TACAGTCTTC GTTCAGCAAT ACGCTTTCAT CGCTTCTGCC GGGCGGCAAC
CTTCTGACTC CGTTTTTCAT GAACCTGTTC ATGGCCGGCG CAACAAATAC CTATCTGACC
TGTCTGGCCG GCATCATAAC CATCAGGCAC AGCCAGATGA TTTCGGAGGA AGACCGGAGA
GATATCATCC AGCAGAGCAT GTTCGAAGCA TCGTTCATGC TCAAGGAGAT CGTCAGGGAG
TGCAATCCCG TGCTTTCGGT CACCATCAGC AACGCAGTCA AGAAAGCAGG TATCGAGAGC
CTCGATACCG TTCAGCCCCC GAATATGGGC AGCAATATCG CCCAGGACAT CGTCTCCCAC
CTGGCAAGTT CACTGAAGCA TATCATCCGC GAGAACATTT CGGTCGAGAA GGGCTCGGAG
CAGTAG
 
Protein sequence
MKKKAIIFFA AALSAALLLA AVITVNQLAA FSALLAGLHP YAGYAFLSFS SLLILFALIT 
GIVFFSSPSR PELPLNETAK QFSAYLAYLA KTLPAHSMHP EPLRREKDLR WLRANLKLLE
VDALNATKQI ATKNFFVGAF AQNTSYGTTT SLMNILKVVW NTYRIHHRTL HAMEFAALVR
SVYACLPLSD FKKEDIPAHI KPIIQSSFSN TLSSLLPGGN LLTPFFMNLF MAGATNTYLT
CLAGIITIRH SQMISEEDRR DIIQQSMFEA SFMLKEIVRE CNPVLSVTIS NAVKKAGIES
LDTVQPPNMG SNIAQDIVSH LASSLKHIIR ENISVEKGSE Q