| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1807 |
|---|
| Symbol | |
|---|
| ID | 6355147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 1985694 |
|---|
| End bp | 1986365 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642669410 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_001943825 |
|---|
| Protein GI | 189347296 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATCT ATTCGAAACC GGTTGTTTTT GCTGTGCTGT CGGCATTGGT GATTCTTGTC
GGAACCATCG TAACGGTGTT CATTCCGCTT TTCATGCCAT CGACACAGCC GGTAAGCCCG
CTCATAAAAC CATACACCGC AATCGAACTT GAAGGCCGGG ATCTGTACAT CCGGGAGGGC
TGCAACAACT GCCATACCCA GACCGTTCGC CCGCTGAGAA CCGAAGTTCT GCGTTACGGC
GAATATTCCA AACCCGAAGA GTTCGCTTAC GACCGCCCCT TCCTCTGGGG TTCCCGCCGT
ACCGGACCGG ATCTGAACAG GATTGGCGGA AAGTACCCCG ACTCGTGGCA CTACCGCCAC
ATGCAGAGTC CGCAGGGCAT GTTCGAAAAA TCCAATATGC CTCCGTACGG ATGGCTTGCC
GAAAACCCGC TCGACACAAG ATATTCTATC AAAAAAATAT CGGTGCTGGG GTATGGGTAC
AGTGCTGCTG AGGTGGAGCG GCAGATTGCG GAATACAAGG CAAAGGTCAC CGCAGCCGAC
TACGACTCGA AAGAGACCCG CGATCAGGTA ACTCCCGAAA AGCTTCGCAA CGATCTCACC
GAAATGGATG CCATGATCGC CTATCTGCAG AAACTCGGCC GGGACGTCAA AAATCTGGAG
GCAACGAAAT GA
|
|---|
| Protein sequence | MGIYSKPVVF AVLSALVILV GTIVTVFIPL FMPSTQPVSP LIKPYTAIEL EGRDLYIREG
CNNCHTQTVR PLRTEVLRYG EYSKPEEFAY DRPFLWGSRR TGPDLNRIGG KYPDSWHYRH
MQSPQGMFEK SNMPPYGWLA ENPLDTRYSI KKISVLGYGY SAAEVERQIA EYKAKVTAAD
YDSKETRDQV TPEKLRNDLT EMDAMIAYLQ KLGRDVKNLE ATK
|
|---|
| |