Gene Clim_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1805 
Symbol 
ID6355144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1982994 
End bp1984058 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content57% 
IMG OID642669408 
Producttranslation initiation factor, aIF-2BI family 
Protein accessionYP_001943823 
Protein GI189347294 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGACG CAATTTCCTT TTCCAACGGA ACATTCCGCT ACCTCGACCA GCGTTTCCTG 
CCACTGCAGG AGCTTCACGT CGAAACCCGT GATTACAAGG AGGCCATCGA GGCCATCAAG
ACTCTCGCCG TAAGGGGCGC TCCGCTCATC GGCGCATCGG CCGGCTATAC GGTTGTGCTC
GGCCTCAACG CATATCAGGG AGACAAGGCT GACTTCCCGG CCTACTTCGA CAAGCTGATC
GCCGAGGTCA ACGCATCCCG CCCGACAGCC GTCAACCTCT TCTTCGCAAC GAAGAAAATG
CAGGCTGTGT ATGACGCTAA CTTCGAAGCA GATTCACTCG AAGCGCTCTT CGCCAAAATG
ACAGACGAAG CGCAAAAAAT CTACTCCGAC GAAGTCGATA ACTGCGACCG GATCGCACGC
CACGGTGTCG AGCAGCTGAA ACGGGATCTG GCTGATGTGC TGAAAACCCG CAAGCTTAAC
GTGCTGACAC ATTGCAACAC CGGCACGCTC GCCTGCTGCG GCATCGGTAC GGCTCTTGGC
GTGATCCGTC TCGCCTGGCA GGAAGGGCTT GTTGAAAGGG TGATCTCCTC GGAAAGCCGT
CCGCTTCTGC AGGGACTGCG CCTGACCGCA TGGGAGCTCG AGCATGACGG CATTCCGTTC
GTTTCGATCT CCGATTCTTC ATCGGCAATC CTCATGCAGC GGGGCATGAT CGACTTTGCC
GTGGTCGGTG CCGACCGCAT CACGGCCAAT GGCGATACGG CCAACAAAAT CGGCACCTAT
GCCCATGCCA TCAGCGCGAA CCACCACTGT ATCCCGTTTT ACATCGCAGC TCCGGTCTCC
ACGATCGACA TCACCCTCTC CGAAGGATCA CAGATACCTA TCGAGGAGCG TAACGCCGAC
GAACTGCGCA CGATTTTCGG CACACAGGTC GCTACGCCAA CCACACCGGT GGTGAACTAC
GCTTTCGACG TTACACCCGG AACCCTCATT CGCGGCATCA TCACGGAGAA AAAAGCCGTC
GTCGGCGACT ACGTGAAAGG CCTCGCGGAA CTCTTCGAAA ACTGA
 
Protein sequence
MIDAISFSNG TFRYLDQRFL PLQELHVETR DYKEAIEAIK TLAVRGAPLI GASAGYTVVL 
GLNAYQGDKA DFPAYFDKLI AEVNASRPTA VNLFFATKKM QAVYDANFEA DSLEALFAKM
TDEAQKIYSD EVDNCDRIAR HGVEQLKRDL ADVLKTRKLN VLTHCNTGTL ACCGIGTALG
VIRLAWQEGL VERVISSESR PLLQGLRLTA WELEHDGIPF VSISDSSSAI LMQRGMIDFA
VVGADRITAN GDTANKIGTY AHAISANHHC IPFYIAAPVS TIDITLSEGS QIPIEERNAD
ELRTIFGTQV ATPTTPVVNY AFDVTPGTLI RGIITEKKAV VGDYVKGLAE LFEN