Gene Clim_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1721 
Symbol 
ID6355799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1892487 
End bp1893242 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content52% 
IMG OID642669325 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_001943741 
Protein GI189347212 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCAA AAAGAATCAT CCCCTGCCTC GATGTCACAG GCGGCAGGGT TGTCAAGGGA 
ATCAACTTCG AAGGACTGAG AGACGCCGGA TCAATTCTCG AACAAGCCCG TTTCTACAAC
GGCGAACTTG CCGACGAACT GGTATTTCTC GATATATCTG CCTCCGTCGA ATCACGCAAG
ACTACTCTTG AAGAGGTGCT GAAAGTTTCC GGTGAAGTGT TCATCCCGCT CACCGTCGGC
GGCGGCATCA ACTCTGTAGA CAGAGCCCGG GAAATTTTCA TGCACGGCGC AGACAAGGTA
TCGGTCAACA CCGCAGTAGT AAAAGAACCG GAACTGATCT CCCGGATTGC CGAAAAATAC
GGATCACAAG CCGTAGTGGT AGCGATTGAC GTGAAAAAGA AAGACGACAG ATACATGGTG
CATACCCACT CCGGCAAAAT ACCGACACCG CTTGAAGCTG TCGAATGGGC GCAGATGGTA
CAGGAGCTGG GAGCAGGAGA GATATTACTC ACAAGCATGG ATCGTGACGG TACGCAGGAA
GGGTATGACA ACGACATTCT TGCGAAGGTA TCCACCTCGG TGCACATTCC CGTTATCGCA
TCGGGCGGAG CAGGCAATCT GGAACACCTC TACGACGGAT TCACCAGGGG AAAAGCCGAT
GCGGCCCTTG CTGCATCAAT CTTCCATTTC CGCCAGTACT CCATCAGACA GGCAAAGCAG
TACCTGCGAG ACCGGGGTAT TCCTGTGAGA CTGTAA
 
Protein sequence
MLAKRIIPCL DVTGGRVVKG INFEGLRDAG SILEQARFYN GELADELVFL DISASVESRK 
TTLEEVLKVS GEVFIPLTVG GGINSVDRAR EIFMHGADKV SVNTAVVKEP ELISRIAEKY
GSQAVVVAID VKKKDDRYMV HTHSGKIPTP LEAVEWAQMV QELGAGEILL TSMDRDGTQE
GYDNDILAKV STSVHIPVIA SGGAGNLEHL YDGFTRGKAD AALAASIFHF RQYSIRQAKQ
YLRDRGIPVR L