Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1721 |
Symbol | |
ID | 6355799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1892487 |
End bp | 1893242 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642669325 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001943741 |
Protein GI | 189347212 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGCAA AAAGAATCAT CCCCTGCCTC GATGTCACAG GCGGCAGGGT TGTCAAGGGA ATCAACTTCG AAGGACTGAG AGACGCCGGA TCAATTCTCG AACAAGCCCG TTTCTACAAC GGCGAACTTG CCGACGAACT GGTATTTCTC GATATATCTG CCTCCGTCGA ATCACGCAAG ACTACTCTTG AAGAGGTGCT GAAAGTTTCC GGTGAAGTGT TCATCCCGCT CACCGTCGGC GGCGGCATCA ACTCTGTAGA CAGAGCCCGG GAAATTTTCA TGCACGGCGC AGACAAGGTA TCGGTCAACA CCGCAGTAGT AAAAGAACCG GAACTGATCT CCCGGATTGC CGAAAAATAC GGATCACAAG CCGTAGTGGT AGCGATTGAC GTGAAAAAGA AAGACGACAG ATACATGGTG CATACCCACT CCGGCAAAAT ACCGACACCG CTTGAAGCTG TCGAATGGGC GCAGATGGTA CAGGAGCTGG GAGCAGGAGA GATATTACTC ACAAGCATGG ATCGTGACGG TACGCAGGAA GGGTATGACA ACGACATTCT TGCGAAGGTA TCCACCTCGG TGCACATTCC CGTTATCGCA TCGGGCGGAG CAGGCAATCT GGAACACCTC TACGACGGAT TCACCAGGGG AAAAGCCGAT GCGGCCCTTG CTGCATCAAT CTTCCATTTC CGCCAGTACT CCATCAGACA GGCAAAGCAG TACCTGCGAG ACCGGGGTAT TCCTGTGAGA CTGTAA
|
Protein sequence | MLAKRIIPCL DVTGGRVVKG INFEGLRDAG SILEQARFYN GELADELVFL DISASVESRK TTLEEVLKVS GEVFIPLTVG GGINSVDRAR EIFMHGADKV SVNTAVVKEP ELISRIAEKY GSQAVVVAID VKKKDDRYMV HTHSGKIPTP LEAVEWAQMV QELGAGEILL TSMDRDGTQE GYDNDILAKV STSVHIPVIA SGGAGNLEHL YDGFTRGKAD AALAASIFHF RQYSIRQAKQ YLRDRGIPVR L
|
| |