Gene Clim_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1717 
Symbol 
ID6355795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1889002 
End bp1889877 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content52% 
IMG OID642669321 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001943737 
Protein GI189347208 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR03381] N-carbamoylputrescine amidase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG AAACAGTTTC CATTGCGCTT GTTCAGACTT CATGCGGGGA AAAGCCTGCC 
GATAATCTTG AAAAAGCCTG TCAGAAAATC AGGGAGGCTG TCGCCAAAGG GGCAAAGATC
GTCTGTCTGC AGGAGCTGTT TACAACACTC TATTTCTGTC AGACGGAGGA TTATGAGCCA
TTCGGGCATG CAGAAGCCAT ACCAGGCCCA TCTACGGATT GCCTGCAGGA GCTTGCCCGT
GAACTTGATG TGGTGATTGT GGCTTCGCTG TTCGAGAAAC GGGCAAGAGG TCTCTATCAC
AATACCGCAG CGGTTATTGA CGCTGATGGA CGTTATCTGG GAAAATACAG GAAGATGCAT
ATACCTGACG ATCCCGGTTT TTATGAAAAA TTTTATTTCA CGCCCGGAGA TCTCGGCTAC
AGGGTGTTCG ATACCCGTTA TGCGCGCATC GGCGTATTGA TCTGCTGGGA TCAGTGGTAT
CCGGAAGCGG CAAGACTTGT CGCCTTGCGG GGTGCTGAAA TTCTATTCTA TCCCACAGCT
ATCGGATGGG CTGCTTCAGA GTGTTCCGAG GAGGTTCGAA TCGCACAGCA GCAGGCCTGG
AAAACCATGC AGCAGAGTCA TGCGATTGCA AATGGGGTTT TCGTTGCGGC CGCCAACCGC
GTAGGGATCG AGGGAGAGCT TGAGTTCTGG GGAAACAGTT TTGTGAGCGA TCCCTTCGGC
CAGGTTATAG CCGAAGCTGC ACATCAGGAC GAAGCTGTTC TCATGGCCAG CTGTGACCGC
AGCAGGATCG GTTTTTACCG TGCTCACTGG CCGTTTCTTC GCGATCGTCG CATCGAGACC
TATGGGGAGC TGCAGAAACG GTTTATCGAG GAGTGA
 
Protein sequence
MSQETVSIAL VQTSCGEKPA DNLEKACQKI REAVAKGAKI VCLQELFTTL YFCQTEDYEP 
FGHAEAIPGP STDCLQELAR ELDVVIVASL FEKRARGLYH NTAAVIDADG RYLGKYRKMH
IPDDPGFYEK FYFTPGDLGY RVFDTRYARI GVLICWDQWY PEAARLVALR GAEILFYPTA
IGWAASECSE EVRIAQQQAW KTMQQSHAIA NGVFVAAANR VGIEGELEFW GNSFVSDPFG
QVIAEAAHQD EAVLMASCDR SRIGFYRAHW PFLRDRRIET YGELQKRFIE E