Gene Clim_1643 details

Gene Information

• Locus tag: Clim_1643
• ID: 6353950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 1780745
• End bp: 1781425
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642669249
• Product: Phosphoribosylanthranilate isomerase
• Protein accession: YP_001943665
• Protein GI: 189347136
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0135] Phosphoribosylanthranilate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGAAAA ATAATAACTT TCAGCCAAAG GTCATGGTTA AGGTAAAAAT CTGCGGTATA 
ACCCGGCTTG AAGATGCCCT TGCTGCCTGC GAAGCCGGAG CGGATGCACT TGGATTCAAT 
TTCAGTTCGA TCAGTCCCCG CTATATCGAG CCGGAGAATG CGGCGAGAAT AATTGCACGG 
CTTCCGCCAT TTGTTGCATG CGCAGGTATC TTTGTCGAAC ACTCAGCTCA TGAAATAAAT 
ACCATCTGCA GTTCATGCCG GCTTCAGGTT GCGCAACTCC ACTCCAATCG ATACGCTGCC 
GATCAGGTTC GGGAGATCGC CAATGTCAGA ATCATAAGAG TTTTTCGTCC GGAGCCGGGG 
TTCGAAACCG GAACGGTCAG AACTTTTTCG GAGAACAGCG GAATCAACAC ATTTCTTTTT 
GATGCTTACC GACCCGGAAT GGAGGGCGGC ACAGGAGAGC GGATAGAACA GAAGCAGGCA 
AAAACTATCT TCGAAGAACT CAGAGGATTC GGCTACGCAA TTCTTGCCGG TGGTCTCAAC 
CCCGAAAACA TTGCTTCAGC GATACAATTG ACCCGCCCCT GGGCAGTGGA TACAGCAAGC 
GGCGTTGAAA GTTCCCCCGG CATCAAAAGC CCCGAAAAAA TCAGGACTTT CATAGCAGCG 
GCAAAAAACG CCTGCCCGTA A 

 

Protein sequence

MQKNNNFQPK VMVKVKICGI TRLEDALAAC EAGADALGFN FSSISPRYIE PENAARIIAR 
LPPFVACAGI FVEHSAHEIN TICSSCRLQV AQLHSNRYAA DQVREIANVR IIRVFRPEPG 
FETGTVRTFS ENSGINTFLF DAYRPGMEGG TGERIEQKQA KTIFEELRGF GYAILAGGLN 
PENIASAIQL TRPWAVDTAS GVESSPGIKS PEKIRTFIAA AKNACP